Gene Rpic12D_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1402 
Symbol 
ID8019047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1480646 
End bp1481182 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID644830181 
Producthypothetical protein 
Protein accessionYP_002981362 
Protein GI241663002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0239807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GCATCTATCA GAAGACCGAA AAAGGTCAGG ACGAGATCCG AACGCGCGCG 
AACCACCTCG ACCAGCGTCA CCGCGCGGTG CTCCTGATGG TGAATGGCGA GAAAACCTGC
GACGACATCC TCGTGCAGCT TCAGCCGCTC GGTATGACGC AAGCGGTATT CGACGAGCTG
GAGGGAGGGG GGTATATCCG CCCGCACTTG GCCAGCAGCA CCACGGTGAA GGCTGTCTCG
ACCGATGAAC CTGCGCCTGC CCCCGCGTCG GCCAGCGCAG TACCCGCAGT GCCTTCAAAA
GAGCCCGCCG CCGAGGGCTA TCAACGCCTC TATCGCTTCT ATACCGAAAC GATCAGCCGG
TATCTGGGCC TACGCGGCTA TCTGCTGGAG ATGAAGGTAG AGAAAGCCGG CAATGTGGCG
GAACTCGTCG CCCTGCGCGA CACGCTCAAG GCCGCGCTCA GCAAAACACG CGGCGAGCCC
GAGACCAGCA ACGTGATCGC CCAGCTCGAT CTGCTGATCG ACGAAGCAAC AGGCTAA
 
Protein sequence
MTTRIYQKTE KGQDEIRTRA NHLDQRHRAV LLMVNGEKTC DDILVQLQPL GMTQAVFDEL 
EGGGYIRPHL ASSTTVKAVS TDEPAPAPAS ASAVPAVPSK EPAAEGYQRL YRFYTETISR
YLGLRGYLLE MKVEKAGNVA ELVALRDTLK AALSKTRGEP ETSNVIAQLD LLIDEATG