78 homologs were found in PanDaTox collection
for query gene Francci3_4252 on replicon NC_007777
Organism: Frankia sp. CcI3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_4252  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 130 aa  249  7e-66  Frankia sp. CcI3  Bacteria  normal  0.78291  normal  0.956838 
 
 
-
 
NC_009921  Franean1_0365  pyridoxamine 5'-phosphate oxidase-related FMN-binding  80 
 
 		 130 aa  204  2e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0234579  hitchhiker  0.00208222 
 
 
-
 
NC_014165  Tbis_0505  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  45.97 
 
 		 125 aa  111  4.0000000000000004e-24  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0846  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  43.9 
 
 		 125 aa  103  1e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.303881  normal  0.0908937 
 
 
-
 
NC_012029  Hlac_0550  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.62 
 
 		 130 aa  102  1e-21  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.0267211  normal  1 
 
 
-
 
NC_013595  Sros_0969  hypothetical protein  42.06 
 
 		 129 aa  101  3e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_0759  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.53 
 
 		 133 aa  97.1  8e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.34478  normal  0.0106192 
 
 
-
 
NC_013124  Afer_0695  pyridoxamine 5'-phosphate oxidase-related FMN- binding  47.96 
 
 		 128 aa  92  2e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1623  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.8 
 
 		 132 aa  89.4  1e-17  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_4829  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.06 
 
 		 142 aa  86.3  1e-16  Frankia sp. EAN1pec  Bacteria  normal  0.0116535  normal  0.0388032 
 
 
-
 
NC_013526  Tter_2143  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  32.81 
 
 		 137 aa  84.7  3e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3594  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  47.92 
 
 		 132 aa  83.6  9e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0641507  normal  1 
 
 
-
 
NC_013158  Huta_2922  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.5 
 
 		 134 aa  81.6  0.000000000000003  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0268055  n/a   
 
 
-
 
NC_014210  Ndas_4464  putative F420-dependent enzyme  40.74 
 
 		 128 aa  80.9  0.000000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1141  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.94 
 
 		 138 aa  80.9  0.000000000000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0166788 
 
 
-
 
NC_013743  Htur_0730  PPOX class putative F420-dependent enzyme  35.71 
 
 		 135 aa  77.4  0.00000000000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3982  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.38 
 
 		 138 aa  77  0.00000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0720616 
 
 
-
 
NC_013739  Cwoe_4056  PPOX class putative F420-dependent enzyme  34.09 
 
 		 133 aa  76.3  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0149029  normal  1 
 
 
-
 
NC_013510  Tcur_2662  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  41.27 
 
 		 132 aa  74.7  0.0000000000004  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000998111  n/a   
 
 
-
 
NC_008148  Rxyl_1056  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  34.35 
 
 		 135 aa  73.9  0.0000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.991641  n/a   
 
 
-
 
NC_009921  Franean1_6594  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.45 
 
 		 129 aa  72.4  0.000000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5602  hypothetical protein  40.8 
 
 		 132 aa  72  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0370067  normal  0.513338 
 
 
-
 
NC_007333  Tfu_2318  hypothetical protein  34.45 
 
 		 133 aa  72  0.000000000002  Thermobifida fusca YX  Bacteria  normal  0.238988  n/a   
 
 
-
 
NC_013922  Nmag_2083  putative F420-dependent enzyme  34.92 
 
 		 133 aa  67.8  0.00000000005  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3713  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.29 
 
 		 135 aa  66.2  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.356128  normal  0.0188302 
 
 
-
 
NC_013440  Hoch_6357  PPOX class putative F420-dependent enzyme  30.47 
 
 		 131 aa  65.9  0.0000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.882388 
 
 
-
 
NC_012669  Bcav_1040  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  34.92 
 
 		 139 aa  63.9  0.0000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.239296 
 
 
-
 
NC_014158  Tpau_1343  PPOX class putative F420-dependent enzyme  31.45 
 
 		 132 aa  63.2  0.000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010085  Nmar_0787  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.83 
 
 		 134 aa  62  0.000000002  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.277304 
 
 
-
 
NC_013131  Caci_7774  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.97 
 
 		 129 aa  60.1  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6642  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.59 
 
 		 165 aa  59.3  0.00000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.5 
 
 		 129 aa  58.5  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.116644 
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  37.11 
 
 		 141 aa  56.6  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_013595  Sros_7841  hypothetical protein  34.62 
 
 		 139 aa  55.8  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.145006  normal  1 
 
 
-
 
NC_013235  Namu_3840  pyridoxamine 5'-phosphate oxidase-related FMN- binding  32.69 
 
 		 143 aa  55.8  0.0000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.338101  normal  0.399447 
 
 
-
 
NC_007777  Francci3_2112  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 		 129 aa  55.8  0.0000002  Frankia sp. CcI3  Bacteria  hitchhiker  0.00365817  normal  0.44749 
 
 
-
 
NC_014165  Tbis_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  40.58 
 
 		 141 aa  54.3  0.0000005  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_2009  hypothetical protein  40.91 
 
 		 129 aa  54.3  0.0000006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.130607 
 
 
-
 
NC_013131  Caci_2043  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.2 
 
 		 130 aa  53.9  0.0000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0860921 
 
 
-
 
NC_013521  Sked_11700  Pyridoxamine 5'-phosphate oxidase  35.29 
 
 		 125 aa  53.1  0.000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0372391  normal  0.434498 
 
 
-
 
NC_013441  Gbro_3285  PPOX class putative F420-dependent enzyme  32.58 
 
 		 130 aa  52  0.000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.696132  n/a   
 
 
-
 
NC_008726  Mvan_2494  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.65 
 
 		 141 aa  52.8  0.000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.313604 
 
 
-
 
NC_009338  Mflv_1362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.3 
 
 		 142 aa  51.2  0.000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0924624  normal  0.216406 
 
 
-
 
NC_013093  Amir_4233  pyridoxamine 5'-phosphate oxidase-related FMN- binding  38.36 
 
 		 143 aa  50.8  0.000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_7022  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.72 
 
 		 143 aa  49.7  0.00001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0832  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  42.86 
 
 		 144 aa  49.7  0.00001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.748606  normal  0.753122 
 
 
-
 
NC_009953  Sare_2829  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.08 
 
 		 159 aa  50.1  0.00001  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0474481 
 
 
-
 
NC_014151  Cfla_2114  putative F420-dependent enzyme  33.61 
 
 		 133 aa  49.3  0.00002  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_2985  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.52 
 
 		 160 aa  48.5  0.00003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  36.75 
 
 		 163 aa  48.1  0.00004  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal  1 
 
 
-
 
NC_008705  Mkms_0400  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.56 
 
 		 140 aa  47.8  0.00005  Mycobacterium sp. KMS  Bacteria  normal  0.615114  normal  0.934587 
 
 
-
 
NC_008146  Mmcs_0391  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  32.56 
 
 		 140 aa  47.8  0.00005  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0379  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.56 
 
 		 140 aa  47.8  0.00005  Mycobacterium sp. JLS  Bacteria  normal  0.061439  normal  0.249477 
 
 
-
 
NC_013441  Gbro_2705  PPOX class putative F420-dependent enzyme  38.36 
 
 		 143 aa  47.4  0.00006  Gordonia bronchialis DSM 43247  Bacteria  normal  0.032805  n/a   
 
 
-
 
NC_013235  Namu_4839  pyridoxamine 5'-phosphate oxidase-related FMN- binding  30.61 
 
 		 132 aa  47.4  0.00006  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2632  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.13 
 
 		 160 aa  47.4  0.00007  Salinispora tropica CNB-440  Bacteria  normal  0.224595  normal  0.27403 
 
 
-
 
NC_013441  Gbro_3771  PPOX class putative F420-dependent enzyme  34.78 
 
 		 143 aa  46.6  0.0001  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0831  putative F420-dependent enzyme  35.71 
 
 		 141 aa  46.6  0.0001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.981538  decreased coverage  0.00628488 
 
 
-
 
NC_009565  TBFG_11179  hypothetical protein  32.11 
 
 		 147 aa  46.6  0.0001  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2877  putative F420-dependent enzyme  35.2 
 
 		 136 aa  45.4  0.0002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.721207  normal  0.137078 
 
 
-
 
NC_014210  Ndas_1607  putative F420-dependent enzyme  37.35 
 
 		 143 aa  45.8  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.105507  normal  0.590252 
 
 
-
 
NC_013510  Tcur_0827  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  37.93 
 
 		 163 aa  45.1  0.0003  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_1991  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.33 
 
 		 143 aa  45.1  0.0003  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000065495  n/a   
 
 
-
 
NC_009921  Franean1_0814  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.94 
 
 		 135 aa  45.1  0.0003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.191647 
 
 
-
 
NC_009664  Krad_0082  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.55 
 
 		 143 aa  44.7  0.0004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.747237  normal  0.05521 
 
 
-
 
NC_008146  Mmcs_1732  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  27.91 
 
 		 143 aa  43.5  0.001  Mycobacterium sp. MCS  Bacteria  normal  0.455039  n/a   
 
 
-
 
NC_008705  Mkms_1779  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.91 
 
 		 143 aa  43.5  0.001  Mycobacterium sp. KMS  Bacteria  normal  0.0691988  normal  1 
 
 
-
 
NC_009077  Mjls_1711  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.91 
 
 		 143 aa  43.5  0.001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_3686  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.51 
 
 		 203 aa  43.1  0.001  Caulobacter sp. K31  Bacteria  normal  0.294993  normal  1 
 
 
-
 
NC_013757  Gobs_0488  PPOX class putative F420-dependent enzyme  38.57 
 
 		 144 aa  42.4  0.002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.620504  n/a   
 
 
-
 
NC_013159  Svir_28180  Pyridoxamine 5'-phosphate oxidase  34.57 
 
 		 133 aa  42.7  0.002  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_1993  PPOX class putative F420-dependent enzyme  31.46 
 
 		 144 aa  42.4  0.002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.98914  n/a   
 
 
-
 
NC_014165  Tbis_1786  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.48 
 
 		 157 aa  42.7  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0705336  normal  1 
 
 
-
 
NC_009380  Strop_3566  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.5 
 
 		 145 aa  42.7  0.002  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0613  pyridoxamine 5'-phosphate oxidase-related FMN- binding  41.27 
 
 		 142 aa  41.6  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.562108 
 
 
-
 
NC_007333  Tfu_0869  hypthetical protein  41.38 
 
 		 154 aa  40.8  0.006  Thermobifida fusca YX  Bacteria  normal  0.331982  n/a   
 
 
-
 
NC_008148  Rxyl_2372  pyridoxamine 5'-phosphate oxidase  43.06 
 
 		 229 aa  40.4  0.007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_4947  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.96 
 
 		 213 aa  40.8  0.007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.635806  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>