Gene Hlac_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0550 
Symbol 
ID7401685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp573501 
End bp573893 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID643707615 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_002565222 
Protein GI222478985 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0267211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG AGTCACACGT CGACATCTTT GAGGCCGAAT CGTACGCCCA CTTCGCGACG 
GTGATGCCGG ACGGAACGCC GCACGTGACA CCGGTGTGGG TGGACCACGA GGATCGCGAG
TACGTCCTCG TTAACACGGC TCGTGGCCGC CAGAAAGAGC GGAACGTCCG CCGGAATCCG
AAGGTGGGCG TGAGCGTGCT CGACCCGACC GACCCGTACC GGTACGTCTC GGTGCGCGGC
GAGGCGGAGC TCACCGAGGA GGGAGCGATT GAGCATATCG ACAAGCTCGC GCGACGGTAC
TTCGACGTCG ACGAGTACCC GCACCACGGC GAGGAGTCCG GCCCGCGAGT GTTGGTGAAG
ATTCCGGCTG AGAACGTTAC GACGAGTGGG TGA
 
Protein sequence
MIPESHVDIF EAESYAHFAT VMPDGTPHVT PVWVDHEDRE YVLVNTARGR QKERNVRRNP 
KVGVSVLDPT DPYRYVSVRG EAELTEEGAI EHIDKLARRY FDVDEYPHHG EESGPRVLVK
IPAENVTTSG