Gene Franean1_6642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6642 
Symbol 
ID5674957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8071819 
End bp8072316 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID641245493 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001510885 
Protein GI158318377 
COG category 
COG ID 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTGGA CGGCCGCCGG CACGGCGCCC GACGCCGGTG CCAAGAGAGG AAATCGACCC 
GTGAGCACTC TGCCGCAGGA ACTGAGGGAC CTCATCGAGT CCGGTCCGAT GGCCCACCTG
ACCACCATCA ACGCCGACGG CAGCCCGCAG GTGACGGTCA TCTGGATCGG CCTGGACGGC
GACGGGATCG TCACCGGGCA CATGTCGAAA CAGGTGAAGC TACGCAACAT CGAGCGTGAC
CCGCGGGTCG TGTTGTCCTT CGACGCCCCG CGGGTGCCGG GCGCCTTCCT GAACCAGTAC
GCCGTGGTGC GGGCACGGGC GACGGTCACG CCGAGCGATG ACACCTGGGA CCTGCTCAAC
CGCCTGGCGA AGGTCTACAT CTCGCCGGAC GCCGAGTTCC CGGTGCCGCG GGGCCCGGGA
TTCATTGTGC GTTACGCCGT GGAGCGCGTC AGTGGTGTCG GCCCGTGGGT ACCGGCGGCC
GGCTCGGCCG CCCACTGA
 
Protein sequence
MGWTAAGTAP DAGAKRGNRP VSTLPQELRD LIESGPMAHL TTINADGSPQ VTVIWIGLDG 
DGIVTGHMSK QVKLRNIERD PRVVLSFDAP RVPGAFLNQY AVVRARATVT PSDDTWDLLN
RLAKVYISPD AEFPVPRGPG FIVRYAVERV SGVGPWVPAA GSAAH