74 homologs were found in PanDaTox collection
for query gene Rcas_3982 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3982  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
138 aa  284  2.9999999999999996e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0720616 
 
 
-
 
NC_009523  RoseRS_1141  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  89.13 
 
 
138 aa  254  2e-67  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0166788 
 
 
-
 
NC_013440  Hoch_6357  PPOX class putative F420-dependent enzyme  40.46 
 
 
131 aa  114  3.9999999999999997e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.882388 
 
 
-
 
NC_013526  Tter_2143  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.39 
 
 
137 aa  105  1e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1056  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  41.41 
 
 
135 aa  104  4e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.991641  n/a   
 
 
-
 
NC_012029  Hlac_0550  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.08 
 
 
130 aa  99.4  2e-20  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.0267211  normal 
 
 
-
 
NC_007777  Francci3_2112  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  44.26 
 
 
129 aa  96.3  1e-19  Frankia sp. CcI3  Bacteria  hitchhiker  0.00365817  normal  0.44749 
 
 
-
 
NC_013595  Sros_2009  hypothetical protein  45.1 
 
 
129 aa  93.2  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.130607 
 
 
-
 
NC_013743  Htur_0730  PPOX class putative F420-dependent enzyme  38.76 
 
 
135 aa  92.8  2e-18  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4056  PPOX class putative F420-dependent enzyme  37.82 
 
 
133 aa  91.7  3e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.0149029  normal 
 
 
-
 
NC_009921  Franean1_1623  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.28 
 
 
132 aa  90.9  5e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_2083  putative F420-dependent enzyme  37.69 
 
 
133 aa  89.7  1e-17  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013158  Huta_2922  pyridoxamine 5'-phosphate oxidase-related FMN- binding  36.43 
 
 
134 aa  88.6  3e-17  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0268055  n/a   
 
 
-
 
NC_013441  Gbro_3285  PPOX class putative F420-dependent enzyme  34.51 
 
 
130 aa  85.9  2e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.696132  n/a   
 
 
-
 
NC_007333  Tfu_2318  hypothetical protein  34.13 
 
 
133 aa  85.5  2e-16  Thermobifida fusca YX  Bacteria  normal  0.238988  n/a   
 
 
-
 
NC_010085  Nmar_0787  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.29 
 
 
134 aa  83.6  8e-16  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.277304 
 
 
-
 
NC_013124  Afer_0695  pyridoxamine 5'-phosphate oxidase-related FMN- binding  39.82 
 
 
128 aa  83.2  0.000000000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0759  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.72 
 
 
133 aa  80.9  0.000000000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.34478  normal  0.0106192 
 
 
-
 
NC_013510  Tcur_2662  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  37.9 
 
 
132 aa  80.5  0.000000000000007  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000998111  n/a   
 
 
-
 
NC_009921  Franean1_0365  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.38 
 
 
130 aa  80.5  0.000000000000007  Frankia sp. EAN1pec  Bacteria  normal  0.0234579  hitchhiker  0.00208222 
 
 
-
 
NC_014210  Ndas_4464  putative F420-dependent enzyme  29.84 
 
 
128 aa  75.5  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2043  pyridoxamine 5'-phosphate oxidase-related FMN- binding  36.27 
 
 
130 aa  75.1  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0860921 
 
 
-
 
NC_012669  Bcav_1040  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  41.3 
 
 
139 aa  74.7  0.0000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.239296 
 
 
-
 
NC_013595  Sros_7841  hypothetical protein  36.89 
 
 
139 aa  73.6  0.0000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.145006  normal 
 
 
-
 
NC_014158  Tpau_1343  PPOX class putative F420-dependent enzyme  35.66 
 
 
132 aa  72.8  0.000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7774  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.5 
 
 
129 aa  72.8  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0505  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.92 
 
 
125 aa  71.6  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3713  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.31 
 
 
135 aa  71.2  0.000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.356128  normal  0.0188302 
 
 
-
 
NC_009921  Franean1_6594  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.82 
 
 
129 aa  68.9  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0846  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.33 
 
 
125 aa  69.3  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.303881  normal  0.0908937 
 
 
-
 
NC_007777  Francci3_4252  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.82 
 
 
130 aa  69.3  0.00000000002  Frankia sp. CcI3  Bacteria  normal  0.78291  normal  0.956838 
 
 
-
 
NC_013595  Sros_5602  hypothetical protein  30.71 
 
 
132 aa  68.6  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0370067  normal  0.513338 
 
 
-
 
NC_009338  Mflv_1362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.03 
 
 
142 aa  65.5  0.0000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0924624  normal  0.216406 
 
 
-
 
NC_014210  Ndas_0831  putative F420-dependent enzyme  39.8 
 
 
141 aa  62.8  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.981538  decreased coverage  0.00628488 
 
 
-
 
NC_013595  Sros_0969  hypothetical protein  31.3 
 
 
129 aa  62  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3594  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.04 
 
 
132 aa  57.4  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0641507  normal 
 
 
-
 
NC_013235  Namu_3840  pyridoxamine 5'-phosphate oxidase-related FMN- binding  32.98 
 
 
143 aa  55.8  0.0000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.338101  normal  0.399447 
 
 
-
 
NC_008146  Mmcs_1732  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  25.58 
 
 
143 aa  53.5  0.0000009  Mycobacterium sp. MCS  Bacteria  normal  0.455039  n/a   
 
 
-
 
NC_009077  Mjls_1711  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.58 
 
 
143 aa  53.5  0.0000009  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1779  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.58 
 
 
143 aa  53.5  0.0000009  Mycobacterium sp. KMS  Bacteria  normal  0.0691988  normal 
 
 
-
 
NC_013202  Hmuk_1091  pyridoxamine 5'-phosphate oxidase-related FMN- binding  30.83 
 
 
152 aa  52.8  0.000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.206809  normal 
 
 
-
 
NC_013093  Amir_2761  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.71 
 
 
142 aa  51.2  0.000004  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000656664  n/a   
 
 
-
 
NC_013131  Caci_6087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.59 
 
 
129 aa  51.2  0.000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.116644 
 
 
-
 
NC_008146  Mmcs_2655  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  35.16 
 
 
135 aa  50.4  0.000008  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2700  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.16 
 
 
135 aa  50.4  0.000008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0176006 
 
 
-
 
NC_009077  Mjls_2685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.16 
 
 
135 aa  50.4  0.000008  Mycobacterium sp. JLS  Bacteria  normal  0.096944  normal 
 
 
-
 
NC_008726  Mvan_5063  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.52 
 
 
141 aa  47.8  0.00006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3995  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  32.18 
 
 
136 aa  47  0.00008  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.955293 
 
 
-
 
NC_014210  Ndas_2054  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  30.77 
 
 
151 aa  46.2  0.0001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.131476 
 
 
-
 
NC_013441  Gbro_3771  PPOX class putative F420-dependent enzyme  33.73 
 
 
143 aa  45.4  0.0002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7022  pyridoxamine 5'-phosphate oxidase-related FMN- binding  30.53 
 
 
143 aa  45.4  0.0002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0506  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.14 
 
 
158 aa  46.2  0.0002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1695  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.88 
 
 
151 aa  45.8  0.0002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  29.52 
 
 
141 aa  44.7  0.0004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_014151  Cfla_0417  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.11 
 
 
140 aa  44.7  0.0004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  31.82 
 
 
141 aa  44.3  0.0005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0379  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.87 
 
 
140 aa  43.9  0.0007  Mycobacterium sp. JLS  Bacteria  normal  0.061439  normal  0.249477 
 
 
-
 
NC_008705  Mkms_0400  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.87 
 
 
140 aa  43.9  0.0007  Mycobacterium sp. KMS  Bacteria  normal  0.615114  normal  0.934587 
 
 
-
 
NC_008146  Mmcs_0391  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  31.87 
 
 
140 aa  43.9  0.0007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  32.32 
 
 
163 aa  42.7  0.001  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal 
 
 
-
 
NC_009077  Mjls_4873  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.91 
 
 
141 aa  43.1  0.001  Mycobacterium sp. JLS  Bacteria  normal  0.28505  normal  0.217615 
 
 
-
 
NC_014151  Cfla_2877  putative F420-dependent enzyme  33.33 
 
 
136 aa  43.1  0.001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.721207  normal  0.137078 
 
 
-
 
NC_008705  Mkms_4577  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.91 
 
 
154 aa  43.5  0.001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.196922 
 
 
-
 
NC_014158  Tpau_1993  PPOX class putative F420-dependent enzyme  30.95 
 
 
144 aa  43.5  0.001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.98914  n/a   
 
 
-
 
NC_009921  Franean1_4829  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.56 
 
 
142 aa  43.5  0.001  Frankia sp. EAN1pec  Bacteria  normal  0.0116535  normal  0.0388032 
 
 
-
 
NC_008146  Mmcs_4490  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  31.91 
 
 
154 aa  43.5  0.001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3876  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.21 
 
 
143 aa  42.4  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0335878 
 
 
-
 
NC_008148  Rxyl_2372  pyridoxamine 5'-phosphate oxidase  33.7 
 
 
229 aa  41.6  0.004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_06490  predicted flavin-nucleotide-binding protein  22.96 
 
 
165 aa  41.2  0.005  Cryptobacterium curtum DSM 15641  Bacteria  hitchhiker  0.00239792  normal  0.449333 
 
 
-
 
NC_009921  Franean1_1437  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.9 
 
 
150 aa  41.2  0.005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  27.27 
 
 
169 aa  40.4  0.008  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.27 
 
 
169 aa  40.4  0.008  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.27 
 
 
169 aa  40.4  0.008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0501649 
 
 
-
 
NC_013521  Sked_11700  Pyridoxamine 5'-phosphate oxidase  33.33 
 
 
125 aa  40.4  0.008  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0372391  normal  0.434498 
 
 
-
 
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