Gene Franean1_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1437 
Symbol 
ID5669842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1732295 
End bp1732747 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID641240358 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001505785 
Protein GI158313277 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATC AGCGTCGAGG TCGCAAGATC GCCATGAGCC CGGCCGAGGT CGATGCGTTC 
CTCGCCGAGG AGCGAACCTG CCGGGTGGCG ACGACCAGCG CGGACGGGCC ACATCTGACG
CCCCTGTGGT TCGTCTGGGA CGGGCAGGCG CTGTGGCTCA ACTCGGTCGT CAAGAGCCAG
CGCTGGACCG ATCTCGAGCG TGACCCGCGG GTGGCGATCG TCGTGGACAC CGGTCACGAG
TTCACCGAGC TGCGCGGGGT GGAGATCCGC GGCCGGGCCG AGAGCGTCGG CGAGGCCCCC
CGCGTTGGCA CCCCCGACCC CGGCCTGGCC ACGCCGGAGC TGCTCTACGC CCGCAAGTAC
GCCGGCCGCG ACGAGATGCA CTACGACGGC CGGCACGCCT GGCTGCGGGT GACCCCGGAG
AAGATCACAA GCTGGGACTT CCGGAAGATG TGA
 
Protein sequence
MKDQRRGRKI AMSPAEVDAF LAEERTCRVA TTSADGPHLT PLWFVWDGQA LWLNSVVKSQ 
RWTDLERDPR VAIVVDTGHE FTELRGVEIR GRAESVGEAP RVGTPDPGLA TPELLYARKY
AGRDEMHYDG RHAWLRVTPE KITSWDFRKM