Gene Strop_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3566 
Symbol 
ID5060041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4085458 
End bp4085895 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content73% 
IMG OID640475821 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_001160375 
Protein GI145596078 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACC AGAGCCAGGC GCCGCTGCTC GAGCTCATCG CGGGGCACCG GATGGGTGTG 
CTGGCGACGC TGCGGCGGGA CGGGCCAGCG CAGCTCTCCA CCGTGCTCTA CGAGTACGAC
CCGGCGGCCG GGCTGATCCG GATCTCGGTC ACCGACGGCC GCGCCAAGGT CGCCAACCTG
CGCCGGGATC CGCGGGTCAG CTTCCACGTC AGCAGCGCCG ACGGCTGGGC GTACGCGGTC
GCCGAGGGGC GAGCCGAGTT GACTCCGGTC GCCGAGCAGG CGGGCGACGC CACGGTTGAG
GAGCTAGTCG CCCTCTACCG CGCGATGCAG GGTGAACACC CCGACTGGGA CGACTTCCGC
CGGGAGATGG TGGCGCAGCG CCGGCTGGTG CTGCGGCTGC ACGTCGAGCG CGTCTACGGC
CTGCCTCCGC GCGGCTGA
 
Protein sequence
MTDQSQAPLL ELIAGHRMGV LATLRRDGPA QLSTVLYEYD PAAGLIRISV TDGRAKVANL 
RRDPRVSFHV SSADGWAYAV AEGRAELTPV AEQAGDATVE ELVALYRAMQ GEHPDWDDFR
REMVAQRRLV LRLHVERVYG LPPRG