Gene Franean1_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0814 
Symbol 
ID5669230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp953015 
End bp953422 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID641239743 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001505178 
Protein GI158312670 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.191647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTCG CCGCCGCCCG GGCCTTCGTC CTGGAGCATC ATCGTGCCGT CCTGGGTACC 
ACCCGCCGTG ACGGCACCCC GCAGCTGTCT CCCGTGCTGG TCGGCGTGGA GGGCGACGCG
CTGGTGATCA GCACCCGCGT CACCGCGCTG AAGGTCACGA ACATCGAACG GGATCCGCGG
GTGCACCTGT GCGTGCTCTC CGACGGCTTC TTCGGGCCAT GGGTGCAGAT CAGCGGCACG
GCCGAGATCA TCCGGCTACC CGACGCCCTT GACGGGCTGG TCGCCTACTA CCGCCAGATC
TCGGGGGAGC ACCCGGACTG GGATGACTAC CGTGCCGCGA TGGTGCGCGA GCAGCGCTGC
CTGATCAGGG TCACGCCGAC CACCGCGGGC CCGGACCGCT CCGGCTGA
 
Protein sequence
MDLAAARAFV LEHHRAVLGT TRRDGTPQLS PVLVGVEGDA LVISTRVTAL KVTNIERDPR 
VHLCVLSDGF FGPWVQISGT AEIIRLPDAL DGLVAYYRQI SGEHPDWDDY RAAMVREQRC
LIRVTPTTAG PDRSG