14 homologs were found in PanDaTox collection
for query gene Dshi_3580 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_3580  core-2/I-branching enzyme family protein  100 
 
 		 495 aa  1008    Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0019  glycosyl transferase family protein  54.95 
 
 		 566 aa  566  1e-160  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00457408  normal  1 
 
 
-
 
NC_007802  Jann_0221  glycosyl transferase family protein  52.43 
 
 		 566 aa  526  1e-148  Jannaschia sp. CCS1  Bacteria  normal  0.780402  normal  1 
 
 
-
 
NC_008686  Pden_2293  glycosyl transferase family protein  53.46 
 
 		 566 aa  461  9.999999999999999e-129  Paracoccus denitrificans PD1222  Bacteria  normal  0.543368  normal  0.309051 
 
 
-
 
NC_008044  TM1040_2488  glycosyl transferase family protein  39.15 
 
 		 525 aa  154  5e-36  Ruegeria sp. TM1040  Bacteria  normal  0.80194  normal  0.91417 
 
 
-
 
NC_008686  Pden_1857  glycosyl transferase family protein  37.74 
 
 		 529 aa  147  4.0000000000000006e-34  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.388068 
 
 
-
 
NC_009952  Dshi_0678  glycosyl transferase family 14  37.74 
 
 		 525 aa  144  3e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.785875  normal  1 
 
 
-
 
NC_007802  Jann_1678  EpsK domain-containing protein  34.91 
 
 		 525 aa  131  3e-29  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_1001  hypothetical protein  32.47 
 
 		 307 aa  70.5  0.00000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.580555 
 
 
-
 
NC_012792  Vapar_6272  glycosyl transferase family 14  30.94 
 
 		 302 aa  64.7  0.000000004  Variovorax paradoxus S110  Bacteria  normal  0.188134  n/a   
 
 
-
 
NC_014150  Bmur_1979  glycosyl transferase family 14  26.28 
 
 		 277 aa  52  0.00002  Brachyspira murdochii DSM 12563  Bacteria  normal  0.178654  n/a   
 
 
-
 
NC_008255  CHU_0861  xylosyltransferase  23.08 
 
 		 300 aa  48.1  0.0004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.487622  normal  0.0646646 
 
 
-
 
NC_013037  Dfer_0169  glycosyl transferase family 14  29.94 
 
 		 294 aa  46.2  0.001  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2457  glycosyl transferase family 14  23.2 
 
 		 330 aa  45.8  0.002  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00687253  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>