| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2488 |
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| Symbol | |
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| ID | 4076853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2628115 |
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| End bp | 2629692 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007812 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_614482 |
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| Protein GI | 99082328 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.80194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.91417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA TCGCCTATAT TCTGCTCTGT CACAAGGATC CGGAGGCCAT CATTCAGCAG
GCCAACCGGC TCACTGCGAC CGGCGATTTT ATGGCGATCC ACTTTGATGC CCGTGCCAAG
ACCCGCGACT ATCGTGCTAT CCGCTCAGCG CTTTCAGACA ATCCCAACGT GACGTTCGCC
AAGCGTCGGG TGAAATGTGG TTGGGGCGAA TGGTCCTTGG TGCGCGCCAC GCTCAATGCG
CTGGAGGCAG CTGTCGACGA GTTCCCGCGC GCAACGCATT TTTATATGCT GTCGGGGGAT
TGCATGGCGA TCAAGACGGC GCAATACGCG CGCGCCTTTC TCGATCAGCA CGACAAGGAT
TTCATCGAGA GCTTTGATTT CTTCGAGAGC GACTGGATCA AGACCGGGAT GAAGGAGGAC
CGGCTGATCT ATCGCCACTA CTTTAACGAA CGCACCCAGA AACGCCTGTT CTATGCCGCG
TTCGAGCTTC AGAAGAAGCT CAAACTGACG CGGGAGGTGC CCGCCGATAT TCAGGTCCAG
ATCGGCAGCC AATGGTGGTG CCTGCGCCGA CGCACCGTCG AAGCTGTGCT TGCGATGACA
CGCAAACGCC GCGACGTGAT GCGCTTTTTT GCCTCGACCT GGATTCCGGA TGAGACGTTT
TTTCAGACGC TTGTGCGCCA CCTCATTCCT GAAGATGAGA TCGAAAGTCG CACACTTACG
TTTTTAATGT TCAGCGACTA CGGCATGCCG GTGAATTTTT ATAACGATCA CTATGATCTG
TTGCTGGGGC AGGATTTCCT GTTTGCGCGC AAAATCAGTC CTGATGCAAA AGAACTGAAA
ACGCGCCTCG GGCGTCTGTA TGCCGCGCGC GATGTGGAGT TCAAAATTTC CAACGAGGGG
CGCAACCTTT ACAAGTTTCT GTCCGAGCGC GGGCGCACCG GACAGCGTTT TGCACCGCGC
TTCTGGGAAA CCGAGAGCAG CCTCGGGCGC GAGCGTGAAT TGTTGATCCT CACCTGCAAG
AAATGGCATG TGGCCAAACG TATGCTGGAG CAGATCCGCA CGCTCACCAA TACGCCCGCG
ATCGAGTATC TTTTCCACGA AGAAGGCACG CCCCTGCCCG ATCTTGGCGG CATCCAGCGC
ACCCTCGCCA AACGCACCCG TCATCGGCGC GCCCTGGTGC GGATGCTGTT TGACTATTAC
GAGACCGACC GGCTGATTAT CTGCCTTGAT CCGTCCGCGC TCGAACTGAT GCATGATTTC
TATTCAGACC GGTCCCACAC GCGGCTCCTG CGGATCGACT GCGATTTTTC GGACAGCTAC
CTCATTGGCC ACGCGCATCG GGTCGGGCTC GCCGGTGAAC ATGCGGCCAA GGCAACGCTT
GAGCGGCTGC TGCCCGCAAT CCGCAACGAC ATCAGCAATG AAATTGACCA AATCCGCGAT
GCGGGTTTTG TGCGCCATTG GACGGTCGCG GAACGCGGCC CCGAGAGCGA CAACGCTCTT
GCGGTTTCAC AGTTTCTGGA CGTGCCGGTT GAGACCGCCC TTGAGGTGGT GCGCACGCCC
TATCTGTTCG CCGACTAG
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| Protein sequence | MAKIAYILLC HKDPEAIIQQ ANRLTATGDF MAIHFDARAK TRDYRAIRSA LSDNPNVTFA
KRRVKCGWGE WSLVRATLNA LEAAVDEFPR ATHFYMLSGD CMAIKTAQYA RAFLDQHDKD
FIESFDFFES DWIKTGMKED RLIYRHYFNE RTQKRLFYAA FELQKKLKLT REVPADIQVQ
IGSQWWCLRR RTVEAVLAMT RKRRDVMRFF ASTWIPDETF FQTLVRHLIP EDEIESRTLT
FLMFSDYGMP VNFYNDHYDL LLGQDFLFAR KISPDAKELK TRLGRLYAAR DVEFKISNEG
RNLYKFLSER GRTGQRFAPR FWETESSLGR ERELLILTCK KWHVAKRMLE QIRTLTNTPA
IEYLFHEEGT PLPDLGGIQR TLAKRTRHRR ALVRMLFDYY ETDRLIICLD PSALELMHDF
YSDRSHTRLL RIDCDFSDSY LIGHAHRVGL AGEHAAKATL ERLLPAIRND ISNEIDQIRD
AGFVRHWTVA ERGPESDNAL AVSQFLDVPV ETALEVVRTP YLFAD
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