| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3580 |
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| Symbol | |
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| ID | 5713811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3770718 |
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| End bp | 3772205 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269509 |
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| Product | core-2/I-branching enzyme family protein |
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| Protein accession | YP_001534914 |
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| Protein GI | 159046120 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCCG CGACCCAGGA CGCGGCACAG ATCCTGCTCG ACCGGTTTGC GCAGGTCACC
CATGTCTCGC TGGTCTCGGG CGATTGCCTG CCGCTGCGTC CGCTCGACCG GCTGCTCGAT
TTCCTCGGCG CGCGCCCGGA CACGGATTTC ATCGAATCGG TTACCGTCTC GGACGTGCCC
TGGACCATCG GCGGCCTGCA GCAGGAGCGT TTCACGCTGC GCTTCCCGTT CTCCTGGCGG
ACCCGGCGCA AGCTCTTCGA CAAGTATGTC GAGATCCAGC GCCGTCTGGG CGTGCGCCGC
CGCGTGCCCA AGGGCCTGGT GCCGCATCTG GGCTCGCAAT GGTGGTGCCT GACCCGCCGC
AGCCTGGAGG CGATCCTCGA AGACCCCCGA CGGGCGGAGT TCGAAGGCTA CTTCGCCCGC
GTCTGGATCC CGGACGAGTC CTACTTCCAG ACCCTCGTGC GTCGGGTCTC CACGCAGATC
GAAAGCCGGT CTCTGATGCT GTCGAAATTC GACACCCAGG GCAAACCCTT CGTGTTCTAC
GACGACCATC TCGACCTGGT GGGCCAGTCG GACTGCTTCC TGCTGCGCAA GGTCTGGCCC
CGGGCCGACA GGCTCTATGC GCAACTGCTC GACCCCGCGC TGGGCGCGCC CGAGCAAGGG
CCGAGCGACC CGCACCGGAT CGAGCAGACC TTCGAGGAGG CGATGCAGCG CGGGCGCGAA
GGGCGACCCG GGCTCTTCAT GCAGAGCCGC TTTCCCAGCG ATACCTGGCA GTCGGGCAAG
ACCGCCGCCC CCTATTTCGC CTTCCAGGGC TATGACGAGG TGATCGAGGG CTTCGCGCCC
TGGCTCGCCC AACGCAGCGG CGCGCGGGTT CACGGGCATC TGTTCGACTG GACCGAGGTG
CAATTCGCCG AGAGGGTGCG GTGTTTCAAT GGCGGTCTGT CGGATGCGGT CAGCCTGCGG
GATTACAACC CGCAGGCCTT CCTGACCAAC CTGATCTGGA ACAGCCGCGG GGAGCCCCAG
TGTTTCCAGA TTGCCCCCTA TGACCGGCAG GACCTGAATG ACTACATGAT GTGGGACCCC
AACGCCCATA TCTCGATCAT CACCGGGGCC TGGGCGTTGA AACTTTTCCG GTCGGACCTG
CCCTTCCGCG ATGCCAGGCG GGAGGCGGCC TGGATGCAGA AGGTCGAGGA CCACTTCCTC
GGCCAGCTGC GCCGCCGGGG CCTGCCTAGT CGGGTGCGTG TCACCTCCCT GGCGGAGTTC
GTGGCCGACC CGGTCGGGCA GCTTCAGGAC GTGCTCGACC AGATGACGCC GGTGTCCCAG
CGCCGCCTCG CTGCGCCCCC GCCGCTGGTC GATCTGGCGG GGTTCGGCGG CTTCCTGCAG
GCGCTCAAGA ACGCCGGGAT GAAGCCCTAC CTGACCGGAG ATTTCCCGCT CGACACCGCG
GGGCTCGGGC AGCCGACGAC GCCCGCCAAA CCCTATCTGG TGACTTGA
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| Protein sequence | MVAATQDAAQ ILLDRFAQVT HVSLVSGDCL PLRPLDRLLD FLGARPDTDF IESVTVSDVP
WTIGGLQQER FTLRFPFSWR TRRKLFDKYV EIQRRLGVRR RVPKGLVPHL GSQWWCLTRR
SLEAILEDPR RAEFEGYFAR VWIPDESYFQ TLVRRVSTQI ESRSLMLSKF DTQGKPFVFY
DDHLDLVGQS DCFLLRKVWP RADRLYAQLL DPALGAPEQG PSDPHRIEQT FEEAMQRGRE
GRPGLFMQSR FPSDTWQSGK TAAPYFAFQG YDEVIEGFAP WLAQRSGARV HGHLFDWTEV
QFAERVRCFN GGLSDAVSLR DYNPQAFLTN LIWNSRGEPQ CFQIAPYDRQ DLNDYMMWDP
NAHISIITGA WALKLFRSDL PFRDARREAA WMQKVEDHFL GQLRRRGLPS RVRVTSLAEF
VADPVGQLQD VLDQMTPVSQ RRLAAPPPLV DLAGFGGFLQ ALKNAGMKPY LTGDFPLDTA
GLGQPTTPAK PYLVT
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