Gene Dshi_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0678 
Symbol 
ID5711514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp684684 
End bp686261 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content65% 
IMG OID641266587 
Productglycosyl transferase family 14 
Protein accessionYP_001532025 
Protein GI159043231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.785875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAGAA TTGCCTTCAT CCTGCTCTGT CACAAGGACC CGGACGCGGT CATCGCCCAG 
GCCCGGCGCC TGGTCTCGGC CGGCGACTAC GTGGCGATCC ATTTCGACGC GCGCGCCCCG
GAGGTCGATT TCACCGCCAT TCATGCGGCC TTGCAGGACT CGCCCAACGT GGTCTTCGCC
CGGCGACGGA TCAAATGTGG TTGGGGGGAA TGGTCGCTCG TGGCCGCGAC GCTGGAGGCT
CTGCGTGCCG CCGTGACCAC CTGGCCCGAC GCCACCCATT TCTACATGGT CTCCGGCGAC
TGCATGCCGA TCAAGACCGC GGAATATGCC CACGCCTTTC TGGACCAGCG CGACTGCGAC
TATATCGAGG CGGTTGATTT CTTCACCTCC GGCTGGATCC GGACGGGGAT GCAGGAAGAC
CGGCTCTACT ATCGTCACTG GTTCAACGAA CGCGAGCAAA AGCGGCTCTT CTACGCCTCC
CTCGGGGTGC AGCGCGCGCT CAAGCTTGCC CGCGAGGTGC CCGAGGGGAT CAAGGTGCAT
ATCGGCTCGC AGTGGTGGTG CCTGCGCCGC GCCACGGTCG AAACCCTGCT GGCCTTCTGC
GCCGAGCGTC CGGATGTGGT GCGCTTCTTC TCGACCACCT GGATTCCGGA CGAAACCTTC
TTCCAGACCC TTGTGCGTCA CCTGATCCCC GAGGCGGAGA TCGAAAGCCG CACGCCGACC
TTCCTGATGT TCTCCGATTA CGGGATGCCG GTGACCTTCT ACAACGACCA CTACGACCTG
CTGCTGGGGC AGGATTTCCT TTTCGCCCGC AAGATTTCCG CCGAGGCGCA GGAGCTCAAG
GACCGGCTCG GCGCGCTCTG GGCCGAGACC GGCCGCAGCT TCGCGATCTC GGGGGAAGGC
AAGCGGCTCC ATGCCTTCCT GACCGGGCAG GGCCGGGTCG GGCGGCGCTA CGTCCCGCGC
TTCTGGGAGG CCGAGGGCAG TCTGGGCCGG GAGCGGGAGC TGCTGCTGAT CGCGTGCAAG
AAGTGGCATG TGGCCAAGCG GGTGCTCGCT CGCGCGCAGG AAGAGCTGGA CGTTCAGGGC
GTGGCTTTCG CCTTTCACGA AGAGGATTGC GTGCTGCCGG ACCTGGGCGG GATCGAGAAA
ACCCTGCAAA AGCGCGCGCG CCATCGCCGC GCCCTGGTGC GGATGCTGTT CGACTATTAC
CAGACCGACC GGCTGGCGCT CTGCATCGAT CCCAGTGCGA TCGACCTGAT GCAGGACTTC
TTCACCGACC GGTCGCGGAC CAAGCTGCTG GAGATCGAGT GCGGCTTTTC CGACAGCTAC
CTGATCGGGC ATGCCCGCCG CGTGGGCCTG GCCAGCGATC ACAGCCCGGA CACGGTGCTG
CGCGAACTGG TGCCCACGAT CCGCGCCGAG ATCGCGTTCG AGCGGGAGCG GATCCGCGAC
GCGGGCTTCT CGGAGGTCTA CCGCATGTCC GAGAGCCATT CCGCCGAAAC CAACGCCGTG
GCCCTTGCAG GCTTCTTCGG CGTACCGGAG ATACGGGCCG AGAGCCTTGC CCGCACCGAC
CATCTTTTCA CCGACTGA
 
Protein sequence
MARIAFILLC HKDPDAVIAQ ARRLVSAGDY VAIHFDARAP EVDFTAIHAA LQDSPNVVFA 
RRRIKCGWGE WSLVAATLEA LRAAVTTWPD ATHFYMVSGD CMPIKTAEYA HAFLDQRDCD
YIEAVDFFTS GWIRTGMQED RLYYRHWFNE REQKRLFYAS LGVQRALKLA REVPEGIKVH
IGSQWWCLRR ATVETLLAFC AERPDVVRFF STTWIPDETF FQTLVRHLIP EAEIESRTPT
FLMFSDYGMP VTFYNDHYDL LLGQDFLFAR KISAEAQELK DRLGALWAET GRSFAISGEG
KRLHAFLTGQ GRVGRRYVPR FWEAEGSLGR ERELLLIACK KWHVAKRVLA RAQEELDVQG
VAFAFHEEDC VLPDLGGIEK TLQKRARHRR ALVRMLFDYY QTDRLALCID PSAIDLMQDF
FTDRSRTKLL EIECGFSDSY LIGHARRVGL ASDHSPDTVL RELVPTIRAE IAFERERIRD
AGFSEVYRMS ESHSAETNAV ALAGFFGVPE IRAESLARTD HLFTD