| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1857 |
|---|
| Symbol | |
|---|
| ID | 4579116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1856995 |
|---|
| End bp | 1858584 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639769177 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_915650 |
|---|
| Protein GI | 119384594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.388068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATCG AGATGGCGCG TATTGCCTTC ATTCTGCTCT GTCACAAGGA CCCAAAGGGC
GTGGTGGCGC AGGCCCGCCG GCTGACGGCC TCGGGCGATT ACGTGTCGAT CCATTTCGAC
GGGCGCGCCA ATCCGGGGGA TTTCGACCTG ATCCGCGAGG CGCTGGCCGA CAATCCCTCG
GTCGTTTTCG CGCAGCGGCG CTGGAAATGC GGCTGGGGCG AATGGTCGCT GGTCGGCGCC
ACGCTGGAAG CGGTGCGTGC CGCCGTCGCC GCCTTTCCGC AGGCGACGCA TTTCTACATG
CTCTCGGGCG ATTGCATGCC GATCAAGTCG GCGGAACATG CCCATGCCTT CCTGGAGGCG
GAGGATTGCG ACTATATCGA GAGCTTCGAC TTTTTCGAAT CGGACTGGAT CAAGACCGGG
TTCAAGGAGG AACGGCTGGT CTATCGCCAC TGGTTCAACG AGCGCACGCA GAAATGGCTG
TTCTACACCA GCTATGAGCT GCAAAAGCGA TTCGGCCTGG AGCGCAGGGT GCCCGCCGAT
ATCCAGGTCA TGATCGGATC GCAATGGTGG TGCCTGCGCC GCCAGACCGT CGAGAAGGTG
CTGGATTTCT GCGCCGCCCG AACGGATGTG ATGCGCTTTT TCTCGACCAC CTGGATCCCG
GACGAGACGT TCTTCCAGAC CGTCGTGCCG CATGTCGTGC CGCGCAAGGA GATCCGCTCG
CGCACGCTGA CCTATCTGAT CTTCACCGAT TACGGCATGC CGGTGACGTT CCACAACGAC
CATTACGATC TGCTGATGGG GCAGAACTAT CTGTTCGCCC GCAAGATCAG CCCCGAGGCG
ATCCGCTTGC GCGAGCGGCT GGGTGCGCTC TGGGCGGCGA GCGGGGTGCA TTTCCCGATC
TCGAACGAGG CGGGGGGACT GTTTCGCTTC CTCACCGCGC GCGGCCGGAT CGGGCGGCGC
TTCGGCCAGC GCTTCTGGGA GGCCGAGGGC AGCCTGGGCC GGGACAATAC GCTGCTGCTG
GTGGTGAGCA AGAAATGGCA TGTCGCCAAG CGGCTGACCG CGGCGATCCG GGCGCAGGCC
GCGATCCCGG CGGTGGATTT CGTCTTCAAC GAGCTCGATG CGCACCTGCC CGATCTGGGC
GGGGTCGAGA CCACGGTCGA AAAGCGTGAC CGGCACCGGC GCGCGCTGAT CCGGCTGCTG
TTCCAGCAGT TCGAATCGCA TCGGCTGGTG CTGTGCCTGG ACCCTTCGGC GCTGCCTCTG
ATCCAGGACC TGACCTCGGA CAAGGCCGAT ACCCGGCTTC TGCTGATCGA TTCGCGCTTC
GACGACGACT ATCTGCGCGG CCATATCGCG CGCGTGGGCC TGGCCGGGAG CGAAACCGCG
TCCGAGGTCA TCGAGCGGCT GCTGCCCATG GTGCGCGCCG ATCTGGAACA TGAGGCCGAA
CGGTTGCGCG ACCTGGACTT CGCCGCCCTG CACTCCATTG CTCCCTGGCG GTCGCCCGAG
CAGAATGCCG CGCAACTGGC GCGTTTCCTG GATGTGCCGG CCGAAACCGC GCTGGCGCTT
GCCAGGACCG AATACCTGTT CAGCGATTGA
|
|---|
| Protein sequence | MGIEMARIAF ILLCHKDPKG VVAQARRLTA SGDYVSIHFD GRANPGDFDL IREALADNPS
VVFAQRRWKC GWGEWSLVGA TLEAVRAAVA AFPQATHFYM LSGDCMPIKS AEHAHAFLEA
EDCDYIESFD FFESDWIKTG FKEERLVYRH WFNERTQKWL FYTSYELQKR FGLERRVPAD
IQVMIGSQWW CLRRQTVEKV LDFCAARTDV MRFFSTTWIP DETFFQTVVP HVVPRKEIRS
RTLTYLIFTD YGMPVTFHND HYDLLMGQNY LFARKISPEA IRLRERLGAL WAASGVHFPI
SNEAGGLFRF LTARGRIGRR FGQRFWEAEG SLGRDNTLLL VVSKKWHVAK RLTAAIRAQA
AIPAVDFVFN ELDAHLPDLG GVETTVEKRD RHRRALIRLL FQQFESHRLV LCLDPSALPL
IQDLTSDKAD TRLLLIDSRF DDDYLRGHIA RVGLAGSETA SEVIERLLPM VRADLEHEAE
RLRDLDFAAL HSIAPWRSPE QNAAQLARFL DVPAETALAL ARTEYLFSD
|
|---|
| |