12 homologs were found in PanDaTox collection
for query gene Dbac_1287 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_1287  CI repressor  100 
 
 
128 aa  262  1e-69  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1712  CI repressor  26.17 
 
 
212 aa  51.6  0.000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0120781  normal  0.203735 
 
 
-
 
NC_007519  Dde_1980  transcriptional regulator, putative  30.77 
 
 
219 aa  47  0.00008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00751555  n/a   
 
 
-
 
NC_013173  Dbac_1065  putative phage repressor  26 
 
 
209 aa  45.8  0.0002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.518416  n/a   
 
 
-
 
NC_007519  Dde_2949  DNA-binding protein, putative  32.26 
 
 
231 aa  43.9  0.0007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2676  putative phage repressor  33.9 
 
 
231 aa  43.9  0.0007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0135442 
 
 
-
 
NC_009802  CCC13826_1434  signal recognition particle protein  43.33 
 
 
446 aa  42.7  0.002  Campylobacter concisus 13826  Bacteria  normal  0.158506  n/a   
 
 
-
 
NC_011769  DvMF_0352  putative phage repressor  25.76 
 
 
261 aa  42.4  0.002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    decreased coverage  0.00411274 
 
 
-
 
NC_008751  Dvul_2281  putative phage repressor  32.2 
 
 
232 aa  42  0.003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3355  hypothetical protein  32.76 
 
 
90 aa  41.2  0.005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.791337  n/a   
 
 
-
 
NC_010814  Glov_0976  putative phage repressor  36.92 
 
 
284 aa  40.8  0.006  Geobacter lovleyi SZ  Bacteria  normal  0.786838  n/a   
 
 
-
 
NC_011883  Ddes_0420  CI repressor  33.33 
 
 
116 aa  40.8  0.006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
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