Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1980 |
Symbol | |
ID | 3756986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2025916 |
End bp | 2026575 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637782866 |
Product | transcriptional regulator, putative |
Protein accession | YP_388472 |
Protein GI | 78357023 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00751555 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGC TGTCTTTTGA TACATTCTTC CGGCGCGTGA AAGAATCGAC CGAAATAAAC ACCCAACAAG CGCTGGCCAG GGCGCTGGGG GTTAACAGGT CCGCCGTTTC ACAGGCCAAA CAGCGTGAAA AAGTGCCTGA GAAGTGGGTA CTGAAAATCG CACGCATGTT TGCGCTGTCC CCTGACTGGC TGGAATCAGG CTCTGGCAGC CATGCGCTCC GCACTGCCGC TTCCGACATG GCGGACGGAA TTTTCATTCC CGTACCTAAA GTGGAGGCAA AACTATCTGC GGGGGGCGGC TCGCTTGAAG TGGGCGCCAC TGCGACCGGA GAGCATCTGT TCCACAGTAC ATGGTTGCGC CGTAAAGGAA ATCCCGCAGA CATGGTACTG ATGGATGTGG TGGGAGACAG TATGGAACCG GAAATATTTG CAGGTGATAC TGTGCTTGTT GATCAGGGAA ACCAGACATT GCGCAACGGA GCCATTTTCG CCATGGGCGT GGATGACTCG GTACTTGTGA AGCGCGTACA AAGTGCCCCC GAAGGTCTGG TACTGCTCAG CGAAAACCCG TCATATTCTC CGGTGCTTCT TCAGGGCGAT GAAATTGAAA CTGTCAGGGT GATTGGCAAA GTCATCTGGA TAAGCAGAGA GTACCGCTGA
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Protein sequence | MEKLSFDTFF RRVKESTEIN TQQALARALG VNRSAVSQAK QREKVPEKWV LKIARMFALS PDWLESGSGS HALRTAASDM ADGIFIPVPK VEAKLSAGGG SLEVGATATG EHLFHSTWLR RKGNPADMVL MDVVGDSMEP EIFAGDTVLV DQGNQTLRNG AIFAMGVDDS VLVKRVQSAP EGLVLLSENP SYSPVLLQGD EIETVRVIGK VIWISREYR
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