| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0352 |
|---|
| Symbol | |
|---|
| ID | 7172236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 409755 |
|---|
| End bp | 410540 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643538850 |
|---|
| Product | putative phage repressor |
|---|
| Protein accession | YP_002434777 |
|---|
| Protein GI | 218885456 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2932] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.00411274 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATG CCTTCGACAC CTTCTTCGCC CGGGTCATGC AGGGCACGGA CATCACCACG
CAGCAGGCCC TTGCCCGCGT GCTGGGGGTG AACCGCAGCG CCATCACCCA GGCCAAGAAC
CGCGATGCCA TCCCGCAAAA GTGGATTCTG CGGCTATCGC GGGTATACGG GCTGGCGCCC
GACTGGCTGG AATACGGTCG CGGCACACCC CGCCCTGCTC CGTTGGCGCA GCCCTTGGCG
GCAGCGGTAC ACGGAGCAGG AAACATCCCC ACGCAGTCGG CCACCAGCCA CTTCAACCCC
GCCGGTTCCG TTCCCGGACG TGCGGCAACG CTGCGACCGG CCATGCCTGC CCCGCACCAC
GGGGACTTGC CCCCCGCCGT GCACATGGTG CCCAAGGTCC GCGCCCGCCT TAGCGCCGGT
GGCGGCTCGT TCGAAGTGCA GGCCATGCCC GTGGGCGGCC AGCCCTTTGC GCATGCCTGG
CTGGCCCGCA AGGGCACCCC TTCGGCCATG GTGCTCATGG ACGTGGTGGG AGACAGCATG
GAACCGGAAA TCCGCGACGG CGACACCGTG TTGGTGGACC GCGCCACCGA AGACCTGCGT
TTCGGTCAGG TCTATGCCGT GGGCCTGGAA GATGCCGTGC TGGTCAAGCG CGTCATGCGC
ACCCCGGACG GCCTGGCCCT TGTCAGCGAC AACCCCGCGT ATTCGCCCAT CCGCGTGCGC
GGCGACGAAC TGGAACAGTT CCGCGTCATT GGCCGGGTGG TCTGGCTGTG CCGCGAAATC
GGATAG
|
|---|
| Protein sequence | MPDAFDTFFA RVMQGTDITT QQALARVLGV NRSAITQAKN RDAIPQKWIL RLSRVYGLAP
DWLEYGRGTP RPAPLAQPLA AAVHGAGNIP TQSATSHFNP AGSVPGRAAT LRPAMPAPHH
GDLPPAVHMV PKVRARLSAG GGSFEVQAMP VGGQPFAHAW LARKGTPSAM VLMDVVGDSM
EPEIRDGDTV LVDRATEDLR FGQVYAVGLE DAVLVKRVMR TPDGLALVSD NPAYSPIRVR
GDELEQFRVI GRVVWLCREI G
|
|---|
| |