13 homologs were found in PanDaTox collection
for query gene Coch_1302 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013162  Coch_1302  transcriptional regulator, MerR family  100 
 
 		 79 aa  160  8.000000000000001e-39  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_0539  transcriptional regulator, MerR family  60.56 
 
 		 111 aa  89.4  2e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_0727  transcriptional regulator  44.44 
 
 		 145 aa  50.1  0.00001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  0.24639 
 
 
-
 
NC_009513  Lreu_1518  MerR family transcriptional regulator  39.58 
 
 		 148 aa  47.8  0.00005  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_0045  MerR family transcriptional regulator  41.46 
 
 		 146 aa  45.8  0.0002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1369  transcriptional regulator, MerR family  50 
 
 		 134 aa  45.8  0.0002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000004274 
 
 
-
 
NC_011146  Gbem_2844  transcriptional regulator, MerR family  47.5 
 
 		 134 aa  44.7  0.0004  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00099405  n/a   
 
 
-
 
NC_007517  Gmet_1724  MerR family transcriptional regulator  42.5 
 
 		 134 aa  42.4  0.002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.232228 
 
 
-
 
NC_013530  Xcel_2778  transcriptional regulator, MerR family  47.62 
 
 		 305 aa  42  0.003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.779446  n/a   
 
 
-
 
NC_008044  TM1040_2931  MerR family transcriptional regulator  33.33 
 
 		 138 aa  40.8  0.006  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.68732 
 
 
-
 
NC_009656  PSPA7_5849  putative transcriptional regulator  44.74 
 
 		 141 aa  40.4  0.007  Pseudomonas aeruginosa PA7  Bacteria  decreased coverage  0.00369897  n/a   
 
 
-
 
NC_009483  Gura_1336  MerR family transcriptional regulator  48.65 
 
 		 134 aa  40.4  0.008  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_1199  MerR family transcriptional regulator  43.24 
 
 		 138 aa  40  0.009  Sinorhizobium medicae WSM419  Bacteria  hitchhiker  0.00877844  normal  0.661473 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>