7 homologs were found in PanDaTox collection
for query gene Coch_1130 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_1130  PKD domain containing protein  100 
 
 
514 aa  1044    Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.0181278  n/a   
 
 
-
 
NC_009441  Fjoh_2433  hypothetical protein  42.88 
 
 
533 aa  387  1e-106  Flavobacterium johnsoniae UW101  Bacteria  normal  0.634913  n/a   
 
 
-
 
NC_008709  Ping_0555  carbohydrate-binding CenC domain-containing protein  42.07 
 
 
1426 aa  108  3e-22  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3716  glycosy hydrolase family protein  35.29 
 
 
1918 aa  62.8  0.00000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.442328  n/a   
 
 
-
 
NC_010506  Swoo_4374  Ig family protein  34.53 
 
 
731 aa  52.8  0.00001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.176149  normal 
 
 
-
 
NC_013501  Rmar_0305  PKD domain containing protein  29.17 
 
 
317 aa  52.8  0.00002  Rhodothermus marinus DSM 4252  Bacteria  unclonable  0.0000000757155  n/a   
 
 
-
 
NC_008255  CHU_1075  beta-glycosidase-like protein  26.21 
 
 
2690 aa  47.8  0.0005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.243053 
 
 
-
 
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