| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3716 |
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| Symbol | |
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| ID | 3522043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3868136 |
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| End bp | 3873892 |
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| Gene Length | 5757 bp |
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| Protein Length | 1918 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286163 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_270383 |
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| Protein GI | 71281571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.442328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCGG TAGCACCACA ATCGCTTGCA ATGCCCAATA CCGTTGGTTC TGTTCAAAGT
AATATCGGTA CGGATAATAC TCAAAAAATA AGCAGCGTTG ATAAAAAAAA TGAAAAAATA
ATCAAGAAAG CTAATAAACA GATTCGAAGA TCAGAAAAAG AAATAAATAA ACTAGAAAAG
ATGATCGTTA AAGAAGAAGG GAAAATTGCT AAGTATGAAG AAAAGATCGA GAAACAAGAA
GAAAAAATAG CCAAGGCAAA AGGTAAAAAT AAAGAAAATA AAATAGCGAA AGCTATGAAT
GAAATTGAAA AATCAAATAG AAAAATTGAA AGGTCTATTG AGAAAATTAC TCAAGCATTG
AGTAAAATAG AAAGTGAAAA AGAAAAAATT TCTGTTGCTA AAGCTATAAT TGAAGACTTA
AATACTCCCG TTCTACAAGA CAGCGACAAT GATGGTGTCG TAGATGATTT TGATTCTTGT
CCAAATACTT TTGCTGAAAC GTTAGTCGAT GCTAATGGTT GCTCACTTGG ACAATTAGAT
AGTGATAATG ACGGCGTAAA TGATGACATT GATCAGTGTC CAGATACTGC TGTAGATGCT
GTAGTTGATA CCAATGGCTG TCTTTCAATT CCACCTACAA GCGATAATGG TCTTCCAATT
ATCAATTTTG AGGTAGGTGG TACCGGCGAA AGCTTTTCTT GGAACGTATT TGAAAATGTT
GATAACCCCG CAGTACAATT TGTTACTAAT CCAGAATCTT CAGGTGTAAA TTCTTCTACA
ACAGTCGCTA TGTTTACCGC GAGAGTCGAT GGTGCTCCAT GGGCAGGTGC TGAAACGGCA
CACGGTAATA TTGGACCAAT TACGCTAGAT GCCACTAACA GCATCATAAA AATAATGGTG
TATAAAACCG TTATCAGTGA TGTTGGACTT AAACTGGCCA TTGCCAATGG CGGTGCTCAA
CCAGAAATTA AAGTGGCTAA TACTTTAATC AATGAATGGG AAGAATTAAC CTTTGATTTT
TCAGGTAACA TCGGTTTATT TGAGTCTATT AATGTAGATC AAATCATCGT CTTCCCAGAT
TTTAATTTGG CGGGTAGAGC ACAAGAGAAT GTGGTTTATT TTGACAACAT TACTTTTAAC
GGTAATGGTG CTGATACAGG TGGCGGTGAT ACCGGTACGG GTGGTGATGG CGACACTAGC
GGTACTATTG AAACTATCAC TTTTGAAGCT AGTGGCACAG GCACGGCTTA TAGCTGGAAT
GTTTTTGAAA ACCTCGACAA CCCAGCAGTA GAAATTGTCA CTAACCCTGA TGCAACGGGT
ACAAACACAT CAACCAGCGT AGCTAAATTT ATCGCTAGAC AAGGAAGTGC TCCTTGGGCA
GGTGCTGAAT CAGCACATGG CGATTTCGGA CCATTAACGT TAGATGCTTC AAACAGCATT
GTAAAAATTA TGGTTTATAA AACAGTCATC AGTGATGTCG GACTTAAATT TTCTATCGCT
AGTGGCGGTG CACAAGGTGA AATTAAAGTA GCGAATACCT TAGTTAACCA ATGGGAAGAA
TTAACCTTTG ATTTCTCAGG TAACATAGGT GCAGTCGAAA GCATTAATAT TGACCAAATC
ATCGTATTCC CTGATTTTGA CTTTGCTCGT AGTCAAGAGA ATGTGGTTTA TTTTGATAAT
ATTAGCTTTT CAGACGGCAC AGGCGGTGGT GACACTGGTA CTGGCGGTGG CGATAATGGC
ACAGGCGGTG GTGACACGGG TACTGATGGC GGCGATACTG GCACTGAAGG TGAGTTATTA
ACGAACAGCT CTTTTGACAA CGGTACTGAA GGTTGGAGTG GAGGAACTGT TATTGTTGAA
GGTGATAATA ATATCTTTAC TGCAGATGTT GCTGCACCAG GTAACCCTTG GGATGTTAAC
TTAAGCCAAG TAATGACACT CGTTCCAGAT GCAACTTATG TTTTAAGTTT TAAGGCAAAA
GCATCAGTGG CACGTACTAT TATTGCAGGA CTTGGTCTAG CGCACGACCC ATGGACTAAT
ACCACTGAAA CAGCAACATT ATCTACACAA TGGCAGAGTT TCACTTACAC TTTGACCACA
TCAGGTTTTG GTGATGATAA CAGTCGCGCA CTGTTTGATA TGGGTAGCGA AGCTGGTACG
GTTTATCTAG ATGATATCAG TGTAATCCTA CAAAATTCTG ATGGTGGCGA CACTGGCACT
GATGGAACCG CGCCAAGTGA AGATTGGTCG ATGGTATGGA ACGATGAATT TGATGGTAGC
GACATTGACT TAAGCAAATG GGAACATGAA GTTAACTGTA GTGGTGGTGG TAATAACGAG
AAACAATGTT ATACCAGCAA CCCTGAAAAT TCATTTGTAG AAAATGGTGC TTTAAAAATT
GTTGCTAAAC CAGAATCTGG TCAAGCATTA CCTTATAGTT CAGCACGTTT ACGTACTAAA
TATAAAGGTG ACTGGAAATA TGGCCGAGTT GAAGTAAGAG CTAAACCTCC ACGTGGTCAA
GGTTCGTTCC CGGCAATATG GATGTTACCA ACTGAAGACG TTTATGGTGG TTGGCCGCAT
TCGGGGGAAA TTGATATTTT TGAATCCGTT AACTTGAAAA CCATTAATAA TCAAGGTATT
GAAGAGGCAG GAGTACATGG TAATCTTTGG TATGGTCGTA GCTGGCCAAA TCAATCAAAC
AGTGGTGCTC ACTTTAGTTT ACCTGGAGAA GCAAACCCTG CTGACGGCTT CCATATTTAT
GCAATAGAAT GGGAAGAAGG CGAAATTCGC TGGTATGTCG ATGGTTACTT ATATCAAACA
CAATTAAGGT CACAAGTGAA TATTGACAGT GACGGCGATG CTAATGGTTT ATTACACCGT
GGTTGGTTTG CTGACTATGA GAATGAATTC CATTGGGATA ACTCGCCATT CAACCAAGAC
TTCCATTTGA TATTAAACTT TGCCGTGGGG GGAAGTTGGT CTGAAAATGT TAATAATGGC
GGTATCGATG CCTCAGCCTT TAATGCTGAC AATGCTTTTG AGTTTGATTA CGTTCGCGTT
TATGAGTGTT CAGTTGACCC TATAACTGGT CAAGGTTGTG CAAGTGTTCG TGATGGTTAT
TTAGATCCTA TTAGCGAGGG TGGTTCATTA GTTGATGGTG ATGCACCAAC ACCAATAAAA
CCTTCAACAG GTGAAGCAAT TGATCTCGTT GTATTTGATA ATGCTAATAA TGAAAGTTGG
CCTGCATGGA GCAGTAATGA AGAAACAACA TTTGCTGTTG TTACCGATGA TGTCGACCAT
GACCAAGTGG TTGAATTTTC AATGGGAGCA GCACCGGCTG TCGTTGGTTT TAATACCTCT
CAAGCGGATA TTCCAGTAGC GTATGACGGT TCACCGATGT TAAATAACGG TTGGTTGGAA
TTTGACATGA AATTGGTGAC GCCACCAAAT AATGCCAATG CCAACTGGAA TTTGAAAGTT
GAACAAGGTG GTACAACGAC TGAAGCGCTT ATTCAAATAT CTACACCCAC CGCAGAATGG
CAGCATTATG CAATATCACT AAACGATTTA AGTAATGCTG GTTTAGAGCT AAACGGTATT
GACGTTATCA TGATTTTTCC AGATTGGGCT CAAGGTGAAG GTGCTGTCTT TAGAGTAGAT
AATATCACTA TTTTGCAAGG TGAAAACACT GGCGGCGATA GCGGCTCTGG TGGAGACACA
GGTGACGGAG ATTCTGGTCC AGTTGCAGGT GAAGAAATTC TAAGCAATGG TTCTTTTGAT
AATGGCACTG AAGGTTGGAT AGGCGCTGTT GCTGTTAATA CCGAAGGTGA TAATACTTTC
TATCAAGCGG ATATTGCAGT AGCAGGTAAC CCATGGGATG TTAACTTAAG TCAAATAATG
ACTTTAATTC CCGGTGAAAC TTATGTTTTA TCGTTTAAAG CAAAAGCATC TATAGCGCGG
AGTATGATTG CCGGTCTTGG TCTTAATTCA GACCCATGGA CAAATGTTAC GGAAACCGTA
GCATTAACGA CGGAGTGGCA AACCTATAAC TATGTGTTCA CTATTGCAGG TTTTGGTGAT
GATAACAGCC GGGTGTTGTT TGATTTAGGC GCTGAAGCAG GTTCAGTTTA TATTGATGAT
GTTAGTGTTT CTATTCAAGC TAATACCGAC GGAAATACTG GTGGTGGAGA TACTGGAGGT
CAAGTAGTTG ACGATGAGTT TGTTATTATT TCTTCTACGG ATGACACTGA TGTTAGCCTT
ACCCCAGATA CTATTGGTGA ATGGAGCACT GGCACGGTAA TTCAAGCTGA TGTTACTTTT
GATGGCTTAA TGGGGTGGGA GCTTACTTCT AGTGCTAACT CACCAGAACA AGGTAACTGG
GGCACTGTAT TAGCTTTCCA AAACGGTATT TTGGGTGACT TTAGTTTATT CAACCGTGTT
GAATTAACAC TAGCGACTAG TGGCGGTTAT GATGGTGGCT TTAAAGTGGC GATATCAGCT
AACGGAGTTA GTAAAGAAAT TAGCCTGCCT CTAGATCAAA GTATTGCAAC TTGGCAAACA
ATTTCAATTG ATGCTGCTGA TATCCCATTG AACTTATCAT CAATTGATTG GATTGCCGTC
TATGGTATTG GTGGCCAAAC AGGCGTTTCA ACTATTAATG TGACTGACTT CTCGCTTATT
AAAAATGAAG CCATTGCCTT TGATAGTGAA ACGAATGATG ACTTTGTCTT TATTTCATCC
GATGCAGATA TCACCAGCGA CTTAATTGTT GATGATGACA ACAATAGTGC TGCTGGCAAC
ATTATCTTTG GTGAGTGGAG CACAGGTACG GCAATAAGCG AAATTAACTA TTCAGGTTTA
GATGCTATTC AACTTACCGC TGGTGGTGGT TGGGGTGCAG TACTTGCCCT ACAAGGTGAT
ATTTCTGATG GCGTAAATGT TGATAACTAT GATGTTGATA TGGCTAATTA TACTAACATT
AAGTTTAAAG TCGCTTCACA AGGGACTTTC GAGCGTTATG CGTTATCTAT TGTTTCTAAA
GTCGGTGCAA ATGAAACTGC TCAAGAAGTT AGCTTTAGCT TAGCAAATCC CGCTGATTGG
AATAGCATTG ATATAGATTT AGCACAGTAC GGTGTTAATT TATCAACTGT AAATCAAATG
GCAGTGTTTG GGGTTTATGC AGGCGGCTCT GCTAGTCAAA AAATCTATAT CACCGATATG
GTGCTTTATG ACACTGGTAA AGTTACGCCA GCAAAAGAAA GCTCAGATGA TAAATTTGTA
TTCTTCTCAT CTAGCGGCGA GAGTTCAGAT ATGATCTTTG ATGGAGATGA CTCAGCGCAT
AATGGCAATA CCACTATTAG CGAATGGTCA ACTGGCACCA CGCTAACATC TGATGTTGTT
TACAATGGCT TAAATGCTTT TGAATTAACA AAAGGTGCAG GTTGGGGCGC GGTACTTGCG
TTAATGGGAG ATACTTATGG AGGTGTGCAA GAGTACAAAT TAGATGTGGC TAAATATAGC
ACCATTAATT TCAAAATTGC TGCTCAAGGT GCCTTCTCTG CTTATTTTAT CGATTTTATT
GTTGATGGTG CAGAATTCAA AGTACCGGTT ACGGTTAATA GTAACTGGAC AGAGGTAAGC
ATCAATGTGG CTGATATACC ACTTAACTTA TCTAAAATTA CACAAATAGC GATATTTGGT
GAAGGTGGTG GTGTAGGTAA TAAAATTTAC ATTACTGATT TAAATATTTC AAAATAA
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| Protein sequence | MFAVAPQSLA MPNTVGSVQS NIGTDNTQKI SSVDKKNEKI IKKANKQIRR SEKEINKLEK
MIVKEEGKIA KYEEKIEKQE EKIAKAKGKN KENKIAKAMN EIEKSNRKIE RSIEKITQAL
SKIESEKEKI SVAKAIIEDL NTPVLQDSDN DGVVDDFDSC PNTFAETLVD ANGCSLGQLD
SDNDGVNDDI DQCPDTAVDA VVDTNGCLSI PPTSDNGLPI INFEVGGTGE SFSWNVFENV
DNPAVQFVTN PESSGVNSST TVAMFTARVD GAPWAGAETA HGNIGPITLD ATNSIIKIMV
YKTVISDVGL KLAIANGGAQ PEIKVANTLI NEWEELTFDF SGNIGLFESI NVDQIIVFPD
FNLAGRAQEN VVYFDNITFN GNGADTGGGD TGTGGDGDTS GTIETITFEA SGTGTAYSWN
VFENLDNPAV EIVTNPDATG TNTSTSVAKF IARQGSAPWA GAESAHGDFG PLTLDASNSI
VKIMVYKTVI SDVGLKFSIA SGGAQGEIKV ANTLVNQWEE LTFDFSGNIG AVESINIDQI
IVFPDFDFAR SQENVVYFDN ISFSDGTGGG DTGTGGGDNG TGGGDTGTDG GDTGTEGELL
TNSSFDNGTE GWSGGTVIVE GDNNIFTADV AAPGNPWDVN LSQVMTLVPD ATYVLSFKAK
ASVARTIIAG LGLAHDPWTN TTETATLSTQ WQSFTYTLTT SGFGDDNSRA LFDMGSEAGT
VYLDDISVIL QNSDGGDTGT DGTAPSEDWS MVWNDEFDGS DIDLSKWEHE VNCSGGGNNE
KQCYTSNPEN SFVENGALKI VAKPESGQAL PYSSARLRTK YKGDWKYGRV EVRAKPPRGQ
GSFPAIWMLP TEDVYGGWPH SGEIDIFESV NLKTINNQGI EEAGVHGNLW YGRSWPNQSN
SGAHFSLPGE ANPADGFHIY AIEWEEGEIR WYVDGYLYQT QLRSQVNIDS DGDANGLLHR
GWFADYENEF HWDNSPFNQD FHLILNFAVG GSWSENVNNG GIDASAFNAD NAFEFDYVRV
YECSVDPITG QGCASVRDGY LDPISEGGSL VDGDAPTPIK PSTGEAIDLV VFDNANNESW
PAWSSNEETT FAVVTDDVDH DQVVEFSMGA APAVVGFNTS QADIPVAYDG SPMLNNGWLE
FDMKLVTPPN NANANWNLKV EQGGTTTEAL IQISTPTAEW QHYAISLNDL SNAGLELNGI
DVIMIFPDWA QGEGAVFRVD NITILQGENT GGDSGSGGDT GDGDSGPVAG EEILSNGSFD
NGTEGWIGAV AVNTEGDNTF YQADIAVAGN PWDVNLSQIM TLIPGETYVL SFKAKASIAR
SMIAGLGLNS DPWTNVTETV ALTTEWQTYN YVFTIAGFGD DNSRVLFDLG AEAGSVYIDD
VSVSIQANTD GNTGGGDTGG QVVDDEFVII SSTDDTDVSL TPDTIGEWST GTVIQADVTF
DGLMGWELTS SANSPEQGNW GTVLAFQNGI LGDFSLFNRV ELTLATSGGY DGGFKVAISA
NGVSKEISLP LDQSIATWQT ISIDAADIPL NLSSIDWIAV YGIGGQTGVS TINVTDFSLI
KNEAIAFDSE TNDDFVFISS DADITSDLIV DDDNNSAAGN IIFGEWSTGT AISEINYSGL
DAIQLTAGGG WGAVLALQGD ISDGVNVDNY DVDMANYTNI KFKVASQGTF ERYALSIVSK
VGANETAQEV SFSLANPADW NSIDIDLAQY GVNLSTVNQM AVFGVYAGGS ASQKIYITDM
VLYDTGKVTP AKESSDDKFV FFSSSGESSD MIFDGDDSAH NGNTTISEWS TGTTLTSDVV
YNGLNAFELT KGAGWGAVLA LMGDTYGGVQ EYKLDVAKYS TINFKIAAQG AFSAYFIDFI
VDGAEFKVPV TVNSNWTEVS INVADIPLNL SKITQIAIFG EGGGVGNKIY ITDLNISK
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