| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4374 |
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| Symbol | |
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| ID | 6118729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5291192 |
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| End bp | 5293387 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635936 |
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| Product | Ig family protein |
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| Protein accession | YP_001762721 |
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| Protein GI | 170728695 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.176149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC AGTGCAAGCG CCTTGCGTTA GTAACTAGCA TCGCTATGGC GATGTCAGGT
TGCGGTTCCG ATTCAAACAC CAGTGAGGGA GTGGAGGTTA TTACTAACTA TCCTCCTGTT
ATCACAAGTA CTGCACTCTT AACTGCTATG GCTAATGAAG AGTACAGCTA TACGGTGACT
GCAACTGATG AAGATAGTGT TGATACGCTC ACTATGTCGG CGCAAACACT ACCTAGCTGG
CTTAACTTTG ATATTGCTAC TGGTGTGTTA TCTGGTACCC CGACGGTTGA GAATGTCGGT
AGCCATCAAG TGACAATCGT GGTCAGCGAT GACACGGTAG AGACCATGCA AACATTTACC
CTTGTAGTGG CAGCACCTGC TAACACACTG CCTGTTATCA CCAGTGTTGG TGTCACTAGT
GCAACAGTAG GAACCGCCTA TAGTTATACC TTGGTGGCGA CAGACGCTGA CAATGATGCC
TTAACTATGT CTGCATCAAC ATTACCTGAT TGGCTTATGT TCGACCCAAG CTCTGGTGTT
CTATCTGGTA CTCCTGCTAT GGAAGATGAG GGGAGCGTAG AGATCACCTT AACGGTTGAG
GATGGCTCAG ATGCAGTCAC TCAAACATTT AGTATTGCTG TGACCAGTGC GCCTAGAGTG
CCGCAGTTAG TGGTTTATGA AGATGCTGCA AATTCACTTT GGCCAGCTTG GGATTGCTGC
GGTGGCACAA CGCCTGCCAT TGTTACTGAC GCTGATGCTG CGTTTGGAAG TGTGACGCAA
TTTACTATTG TGGGTGACAC TGTGGTTGGT TTTAACGCAA GAGATGCGGT CGATGGTGTC
GCATTTGATA CACCTAATGG CACCATTTTA GAGTTCGACC TTAAAGTGAA TACCATGCCA
AGTGCGGGTG ATACCAACTG GATGTTAAAG TTAGAGGGTG CTGGGGTGGC TTTTGAAGTT
AATCTGAATA CCAGTGCAGA GGGGCTTGCG CCTGTTCTGG ATACTTGGAT GCACTACACC
TTTGATTTGT CTGATTCAGG TTTGAGTGAA GTTGATCTTA TTATGATGTT TCCTGCATGG
GGTACAGGTG ACGGGGCTAT ATTCAGTGTT GATAATGTAG AGTTTTATAA TGATGCCGCA
ACGACTCCTG AGCCAGAACC GGAACCAGAG CCAGAACCAC AACCAGCTCC ATCATCGGCA
CTGACGATAT TTTCAGATGT TGTTGATACC AACTGGAGTC AGTGGAGTGA TGGCGATGCC
ACTGCAGAGT TAGTTACAGA TGCTGATGTG GCTTATGGCG CTACTGTTGA GTTTGGCACT
GCAGGTCAAA CCGTTGCTGG TTTTTCAAAT CGTGAAGATT TAGGCGGAAC AGGTGTCACC
TTTGATGCCA GTAGTTTCGC TTCAACGGGA ACACTTGAGT TTGACCTGAA AATGACAGCA
GAGCCTGCAA CAACCGTGTG GAAACTTAAG GTTGAGGGAA CTGGTGCGGT AGAAGTTGAT
CTACCTCAAA CTCCAGTGTT GGATGTTTGG ACTCACTACT CATTTAATTT AAGTACCTTA
GGCGATCTTT CTGCCATAAA TAATATTATG GTGTTCCCTA ATTGGGCTGA TAATGCCGGT
GCCGTTTATC GCATCGATAA CCTTAAGCTA CTTACTACAG GTAATGTGAG CTCAAACTCC
GGTGGCAGTG CAATAATTGA TGTAGCTACA GGCATCGATT TTGAAGGTGA TGAAAGTCAG
CAAGCGAGTT GGATAGCGTT TGAAAATGGC GATCCGTCTC CAGCGCTTGA GTTTGTGAGT
AACCCCGATC CAGTGGGGAA CACGTCAGCT ACTGTTGCTA AACTCAATCT GATGGCATCT
GGCAGTATGT GGGGGGGGGC GATAGTTGAC TCTGTGACGC CATTTGCATT GAGCGCGAGT
AATGCCGTCG TCAAAATTTG GGTTTACAAG GATCGAATTA GCCCAGTTGG CGTTAAGTTT
GAGAATGCTA CTCAAGGTTC CCATGGCGTG AGAACAGCCA CTAATACGCT AATTAATCAG
TGGGAGGAGC TCACCATCGA CTTTACCGCA GATATCGGTT TACCTGAAAA CGGCGCGATA
ACTGCTATTG CAGTGTTCCC TGACAATTTC CCTGAGACTG AATCGAGAGA AAGTGATGCA
ACAGTTTACT TCGATAACAT TACGTTTGGT AATTAA
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| Protein sequence | MKIQCKRLAL VTSIAMAMSG CGSDSNTSEG VEVITNYPPV ITSTALLTAM ANEEYSYTVT
ATDEDSVDTL TMSAQTLPSW LNFDIATGVL SGTPTVENVG SHQVTIVVSD DTVETMQTFT
LVVAAPANTL PVITSVGVTS ATVGTAYSYT LVATDADNDA LTMSASTLPD WLMFDPSSGV
LSGTPAMEDE GSVEITLTVE DGSDAVTQTF SIAVTSAPRV PQLVVYEDAA NSLWPAWDCC
GGTTPAIVTD ADAAFGSVTQ FTIVGDTVVG FNARDAVDGV AFDTPNGTIL EFDLKVNTMP
SAGDTNWMLK LEGAGVAFEV NLNTSAEGLA PVLDTWMHYT FDLSDSGLSE VDLIMMFPAW
GTGDGAIFSV DNVEFYNDAA TTPEPEPEPE PEPQPAPSSA LTIFSDVVDT NWSQWSDGDA
TAELVTDADV AYGATVEFGT AGQTVAGFSN REDLGGTGVT FDASSFASTG TLEFDLKMTA
EPATTVWKLK VEGTGAVEVD LPQTPVLDVW THYSFNLSTL GDLSAINNIM VFPNWADNAG
AVYRIDNLKL LTTGNVSSNS GGSAIIDVAT GIDFEGDESQ QASWIAFENG DPSPALEFVS
NPDPVGNTSA TVAKLNLMAS GSMWGGAIVD SVTPFALSAS NAVVKIWVYK DRISPVGVKF
ENATQGSHGV RTATNTLINQ WEELTIDFTA DIGLPENGAI TAIAVFPDNF PETESRESDA
TVYFDNITFG N
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