10 homologs were found in PanDaTox collection
for query gene Coch_0606 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_0606  Heparinase II/III family protein  100 
 
 
705 aa  1477    Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2408  Heparinase II/III family protein  30.95 
 
 
772 aa  137  5e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0504135  normal 
 
 
-
 
NC_011662  Tmz1t_1390  Heparinase II/III family protein  24.63 
 
 
1200 aa  102  4e-20  Thauera sp. MZ1T  Bacteria  normal  0.274329  n/a   
 
 
-
 
NC_007517  Gmet_1999  hypothetical protein  31.03 
 
 
948 aa  77.4  0.0000000000007  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3104  heparinase II/III family protein  30.13 
 
 
760 aa  59.3  0.0000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.220096  n/a   
 
 
-
 
NC_009972  Haur_2313  hypothetical protein  22.51 
 
 
814 aa  55.8  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.862901  n/a   
 
 
-
 
NC_014230  CA2559_11508  putative chondroitin AC/alginate lyase  24.62 
 
 
759 aa  54.3  0.000008  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0906796  n/a   
 
 
-
 
NC_012917  PC1_3947  thr operon leader peptide  26.14 
 
 
624 aa  48.1  0.0005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1166  Heparinase II/III family protein  21.38 
 
 
741 aa  47.8  0.0007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.307073  n/a   
 
 
-
 
NC_013037  Dfer_1685  hypothetical protein  21.84 
 
 
629 aa  45.4  0.004  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.238249  normal  0.0538261 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>