Gene PC1_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3947 
Symbol 
ID8134934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4452510 
End bp4454384 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content45% 
IMG OID644867254 
Productthr operon leader peptide 
Protein accessionYP_003019498 
Protein GI253690308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA TCTCTCTGGC TATAATGATG ACTACCATTT TCATCACTCC CTCCGTGCTG 
GCTGCTGTTC CTGACGCTCA TGAATTTAAC GCTATCAATA TATTTACTCG CGATACTGTC
GTTAAAAATT TAAAAAAAGA TCATCCAAGA TTATTGATGA CTGGCGAGGA TATAAAAATT
ATCCAAGAGC AGGTTAAAAG CGATGAAGAG ATGAAAAAGC TGGTTGATGA GGTGATTAGA
CGGGCTGAAG GAAGCCTTAA TGAGCCGGTT ATTCATTATA AATTGACTGG GAACGATGCA
TCACCTTCAT TACTGGATAC ATCGCGGAAG GCTATAAAGA TTATCCTGGA TAATGCATTT
TCCTGGAAAA TCACCGGAGA TGCTCGTTTC GCTAAAAAAG CGAAAGAAAC CGTGCTTGCC
GTATCTGACT TTCCTGACTG GAATGCGCAA TCCCGTTTTC TTGATGCTGG AGAAATGATG
TTTGCGGTGG CTATCGGCTA TGACTGGCTT TACGACCAGT TCTCCGCCGA AGAAGAGAAG
CAAATTCGGG AGGCACTACT TGAGAAGGGA ATTAATTGGG GATTAAAAGC TTACGCTGAC
AAGGATCCTG CCGCGCCCAG CCTGGGGTTT CCATGGTGGG CGACCAATTG GAATGAAGTC
TGCAACGGCG GGGTACTCGC AGCAGTTCTT GCTACTGCGG AACATTATCC CGAACGGACA
CTGACGCTGC TCAACAATAT TATCCCCTCG CTGAAGATGG GGCTGGATGC CTATAAACCA
GATGGCGCGA GTGCAGAAGG CCCCATTTAT TGGAGCTACG GTATGACCTA TCGCATTATT
GCGCAGGAGA TGCTGAGAAG CGCGTTTGGT CAGGATTATG GTTTATCGTC AGATACCGTT
CTGGAAAAAA CACCCTGGTA TCGTTTTGCT ATTGAAGGTT TCTCTGGTGA TGGTTTCAAC
TACGGTGATG CGGTAGAAGA TCAGGGTTAT ACCCCCGCTT ATGCCTGGTT CGGCAATCGC
TACAAACAAG ATCTCATTAT TAATGCTGCC AGAGGACAGA TGCAGAAAGC GCTAACGCGC
TCAGCAGCAG GGAAGGTGTG GGGAGAGTTC GATCGCTTTT TGCCACTATT TGCGCTGTGG
TATCCACAAG CCGTGAGCGT TAGTGGCGCA ACGACACAAG ATAACTTTCT GTTTCATGGA
CCATCAGCGC TTTTTATTTA TAAGAAGCAA TTTTCAGATG GGGGAAATGT CTGGTTAGGT
ATTAAGTCTG GTGACAATAA AGCGAATCAT GCCCATCAGG ATCTTGGCTC TTTTGTTCTG
GAATATGATG GTGTCCGCTG GGCTAATGAT TTAGGCAAAG ACTATTATAA TCTCCCCGGT
TATTTTGATA ATTCCGTGCG GCCATCGTAT TTCCGCGTAT CTGCCTTAAG CCATAACACG
CTCACCTTTG ATGGTGACAA TCAGGATCCT AATGGCGTGG CGACACTCAT TTGGGATGAA
AAGCAATCAA CGGCAAGGCT TGAATTAACA CATGCCTATC CTGATGTCGC GGAAAATATA
CTCAGAGAAT ATCGGTTAGA TGGAAAAGCC ATAACAATAA GTGATGCAAT ACAAGGAACC
TACAACCCCA AAATATACCG TTGGGCAATG GTGACAACTG CCGAGATCAC TATCAAGGGC
AATACGGCAT TGTTGACCAA AGAGGGTAGG ACGATCAACG TGATAAAAGA TGATGATTCT
GCGGAATTTC GTGTTCTATC GACAAAACCT GCCGATAACC GACAAAAGGA TAACGTGGGA
ACATCCATGT TGGCAGTACA AAAGGAAATA CCTGCAAAAT CTGATTACAG AATCAATGTC
ACCATTACGC CATGA
 
Protein sequence
MNRISLAIMM TTIFITPSVL AAVPDAHEFN AINIFTRDTV VKNLKKDHPR LLMTGEDIKI 
IQEQVKSDEE MKKLVDEVIR RAEGSLNEPV IHYKLTGNDA SPSLLDTSRK AIKIILDNAF
SWKITGDARF AKKAKETVLA VSDFPDWNAQ SRFLDAGEMM FAVAIGYDWL YDQFSAEEEK
QIREALLEKG INWGLKAYAD KDPAAPSLGF PWWATNWNEV CNGGVLAAVL ATAEHYPERT
LTLLNNIIPS LKMGLDAYKP DGASAEGPIY WSYGMTYRII AQEMLRSAFG QDYGLSSDTV
LEKTPWYRFA IEGFSGDGFN YGDAVEDQGY TPAYAWFGNR YKQDLIINAA RGQMQKALTR
SAAGKVWGEF DRFLPLFALW YPQAVSVSGA TTQDNFLFHG PSALFIYKKQ FSDGGNVWLG
IKSGDNKANH AHQDLGSFVL EYDGVRWAND LGKDYYNLPG YFDNSVRPSY FRVSALSHNT
LTFDGDNQDP NGVATLIWDE KQSTARLELT HAYPDVAENI LREYRLDGKA ITISDAIQGT
YNPKIYRWAM VTTAEITIKG NTALLTKEGR TINVIKDDDS AEFRVLSTKP ADNRQKDNVG
TSMLAVQKEI PAKSDYRINV TITP