Gene Coch_0606 details

Gene Information

• Locus tag: Coch_0606
• ID: 8367023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 759173
• End bp: 761290
• Gene Length: 2118 bp
• Protein Length: 705 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644983033
• Product: Heparinase II/III family protein
• Protein accession: YP_003140725
• Protein GI: 256819446

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CAGTATTTAT GATGCTATGG ACTCTGTTAA TAGCGATGCT ATCGTGTCGT 
AAAGATACAG ACCCTAATGA GCAAGAGATA ACAGGCGTTG TTCGCACCGA ACACCCACGC 
CTTTTTATTA CTAAAGAAGA TATTCCGAAT ATCAAAAACG TTACCCAAAG TTCGGCTCTG 
GATACGTATA CCGAAACTAA AAGAGATGTG GATAAGCTCT TAAATGAACC TATCTCTTTT 
GAAAATCCTA CCGCGGTGAA TGGTACTGAT AACGGTTTGA AAATCTCCAA AGTATCGCAA 
GTCGCCATAT TATATTTGAT AACAGGTGAA GCAAAATATC TCGACTATAC CAAAAAATTC 
TTACAAAAAA TCACTGAATA TTACCGCCTT AGGGTAAGTC ACAACTTGAA TGCTGATTGG 
TATGTGTTTC CTCAAATCAA TGCATTATGC GCTTATGATT GGATTTACAA CTACTTAACC 
CCCAAAGAAC GCGAGCAAAT AGGCAAACCT CTTTATCAGG TAATGATGGA TATTGCTTGG 
CACGGAAAAG GACTACGCCC AGAGCGCAAT CGGGAGAATA CAGGGGGATA CAATACAGGA 
TTTTATGGCA CAGACGCCCT ACCGTGGTAT ATAGGTATCA CCTTTCACAA CGACGGTATT 
GATAACGCAC GCTGTGAAGA TATGTTTCAA AAAGGATTTG CCCTAAATAT GAAAATGGCA 
GAATATCGTC GTGATATTAT CGGTATGAGC GGAGGGGCTG TCACAGGGTG TGTAGGCTAT 
TCGTTAGGTG CTTATCCTAT CGCCGATTTC AATTTCATTC GCAGTCATCG CGTAGCCACA 
GGCGTAGACC TCTCTCAAAG GCTCAACTAC GTATTTAAAT ATTTGGACTA TATCGATTGG 
AATCGCTTAC CAAACAATCG CGAGTTTGGC TTTGGCGACA GTTATCACTA CGATTGCTTG 
CTCCCCGAAA GAGACATCAA TTATCACCTA AGAGAGATAG CCTCTCTTTA TGGAAGTTCT 
ACCAATATAC AACGCCTGTT AGGCTTATTC AATAAGAAAC ATTATACAGA ACGACTACCC 
TTTATGCCGT TCTTACAAAA ATATCCTCAA GGAACTCAGG GAGCGACACC TTCGGGTAAA 
GGTGCCGTGT ATTTCGAGGG TACGGGAGAA GTCATTATGC GTTCAGGAAC GGGCGAAAAC 
GACACTTATG CTCTTTTTGT GAGCGGAGGC AAAACCTCTT ACCACAAGCA CTTCGATAAT 
AATCATTTCA CTATCTACAA AAAAGGTTAC CGTGCGTTAG ATACAGGCAC ACGCCCCGAA 
CCTGGCTGGC ATCTGTCGCA TTACTACGCC CGTACAGTAG CCCATAACTG CGTAACCATC 
AGAATGCCCA ATGAAAAAAT GCCCGAATAC TGGGGCGGAG GGGCTTCTAC CGAAAACAAG 
TTCGAACCTA TCCCCAACGA TGGCGGACAA AACAACATAT TAGGCTCTGT GCTGAAAGAG 
AAGCGTATCA CTGACGATTA TGTATATCTC GCCTCCGATG CTACTAAAAG CTACAACAGC 
CAAAAAGCCT CGTTAGTCGT GCGTGAATTT ATATATTTCT ACCCCGACCT TTTTATAGTA 
TTCGATAGGG TGACGGCTAC CGACAAAAAT TTTCCCAAAA CGTGGCTGAT ACACACCATC 
AACGAACCTG TGATGAAAGG TAGCAGAGAG TTCTCGGAAA CCTCCGACGG AGGCAAGATG 
ATTTGCCGTA CTTTATTCCC TGCCAATGCT ACACTTACTA AAATAGGAGG AAGTGGGAAG 
GATTTCTGGT CTGATGGACG CAACTGGCCT CTACCCAAAC TCACTCCACA AGATTATGGG 
TATAATATGA ACCTCCCTCC TGCCAATCAC CCACAATTGG GACACTGGCG TATAGAAGTG 
AGCCCACAAA CGGCTTCTAA AGAAGACTTG TTTATGCATA TTATCCAAGT AGGCGATACA 
GCTCTTTCCG ATTTACCCCG CACTGAAACC TTTGAAAATA CAGCTCAAAT AGGGGTAAGA 
TTCACCTACC AAGGAAAACG ATATATTTTA ACCTTTGATA AAACAAAGTC ATACGGCTGT 
CAAATAGAGA AGAAATAA 

 

Protein sequence

MKKAVFMMLW TLLIAMLSCR KDTDPNEQEI TGVVRTEHPR LFITKEDIPN IKNVTQSSAL 
DTYTETKRDV DKLLNEPISF ENPTAVNGTD NGLKISKVSQ VAILYLITGE AKYLDYTKKF 
LQKITEYYRL RVSHNLNADW YVFPQINALC AYDWIYNYLT PKEREQIGKP LYQVMMDIAW 
HGKGLRPERN RENTGGYNTG FYGTDALPWY IGITFHNDGI DNARCEDMFQ KGFALNMKMA 
EYRRDIIGMS GGAVTGCVGY SLGAYPIADF NFIRSHRVAT GVDLSQRLNY VFKYLDYIDW 
NRLPNNREFG FGDSYHYDCL LPERDINYHL REIASLYGSS TNIQRLLGLF NKKHYTERLP 
FMPFLQKYPQ GTQGATPSGK GAVYFEGTGE VIMRSGTGEN DTYALFVSGG KTSYHKHFDN 
NHFTIYKKGY RALDTGTRPE PGWHLSHYYA RTVAHNCVTI RMPNEKMPEY WGGGASTENK 
FEPIPNDGGQ NNILGSVLKE KRITDDYVYL ASDATKSYNS QKASLVVREF IYFYPDLFIV 
FDRVTATDKN FPKTWLIHTI NEPVMKGSRE FSETSDGGKM ICRTLFPANA TLTKIGGSGK 
DFWSDGRNWP LPKLTPQDYG YNMNLPPANH PQLGHWRIEV SPQTASKEDL FMHIIQVGDT 
ALSDLPRTET FENTAQIGVR FTYQGKRYIL TFDKTKSYGC QIEKK