| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2408 |
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| Symbol | |
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| ID | 8253515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2800682 |
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| End bp | 2803000 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936058 |
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| Product | Heparinase II/III family protein |
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| Protein accession | YP_003092674 |
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| Protein GI | 255532302 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0504135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC AATTATACCT GTATGTGATT TTTGTTGTAG TTGAACTTAT GGTTTTTACA
ACAAAGGGCT ATTCCCAAAC CAAGGCCGAT GTGGTTTGGA AAGACGTGGA TGGCGTATCT
ATGCCCATAC CCCCTAAGAC CCACCCGCGT TTGTATCTAC GTGAGCAGCA AGTTCCTGAC
CTGAAAAACA GGATGAACGA CCCTAAACTG AAAAAAGTTT GGGCCGATAT GATCAAGATG
CAGGAAGACT GGAAGCCAGC TGATATTCCT GAAGTTAAAG ACTTTCGTTT TTATTTTAAC
CAGAAAGGGC TTACTGTAAG GGTTGAACTA ATGGCCCTGA ACTATCTGAT GACCAAGGAT
CCAAAGGTAG GACGGGAAGC CATCACTTCA ATTATTGATA CCCTTGAAAC TGCAACTTTT
AAACCAGCAG GTGATATTTC GAGAGGGATA GGCCTGTTTA TGGTTACAGG GGCCATTGTG
TATGACTGGT GCTACGATCA GCTGAAACCA GAAGAGAAAA CACGTTTTGT GAAGGCATTT
GTGAGGCTGG CCAAAATGCT CGAATGTGGT TATCCTCCGG TAAAAGACAA GTCTATTGTT
GGGCATGCTT CCGAATGGAT GATCATGCGG GACCTGCTTT CTGTAGGGAT TGCCATTTAC
GATGAATTCC CTGAGATGTA TAACCTGGCT GCGGGTCGTT TTTTCAAAGA ACACCTGGTT
GCCCGCAACT GGTTTTATCC CTCGCATAAC TACCATCAGG GTATGTCATA CCTGAACGTA
AGATTTACCA ACGACCTTTT TGCCCTCTGG ATATTAGACC GGATGGGCGC TGGTAATGTG
TTTAATCCAG GGCAGCAGTT TATCCTTTAT GACGCGATCT ATAAACGCCG CCCCGATGGA
CAGATTTTAG CAGGTGGAGA TGTAGATTAT TCCAGGAAAA AACCAAAATA TTATACGATG
CCTGCATTGC TTGCAGGTAG CTATTATAAA GATGAATACC TTAATTACGA ATTCCTGAAA
GATCCCAATG TTGAGCCACA TTGCAAATTG TTCGAATTTT TATGGCGCGA TACCCAGTTG
GGAAGTCGTA AGCCTGATGA TTTGCCACTT TCCAGGTACT CAGGATCGCC TTTTGGATGG
ATGATTGCCC GTACCGGATG GGGTCCGGAA AGTGTGATTG CAGAGATGAA AGTCAACGAA
TATTCCTTTC TTAACCATCA GCATCAGGAT GCAGGAGCCT TCCAGATCTA TTACAAAGGC
CCGCTGGCCA TAGATGCAGG CTCGTATACT GGTTCTTCAG GAGGTTATAA CAGTCCGCAC
AACAAGAACT TTTTTAAGCG GACTATTGCA CACAATAGCT TGCTGATTTA CGATCCTAAA
GAAACTTTCA GTTCGTCGGG ATATGGTGGA AGTGACCATA CCGATTTTGC TGCCAACGAT
GGTGGTCAGC GGCTGCCCGG AAAAGGTTGG ATTGCACCCC GCGACCTTAA AGAAATGCTG
GCAGGCGATT TCAGGACCGG CAAAATTCTT GCCCAGGGCT TTGGTCCGGA TAACCAAACC
CCTGATTATA CTTATCTGAA AGGAGACATT ACAGCAGCTT ATTCGGCAAA AGTGAAGGAA
GTAAAACGTT CATTTCTATT CCTGAACCTT AAGGATGCCA AAGTTCCGGC AGCGATGATC
GTTTTTGACA AGGTAGTTGC TTCCAATCCT GATTTTAAGA AGTTCTGGTT GTTGCACAGT
ATTGAGCAGC CTGAAATAAA GGGGAATCAG ATTACCATAA AACGTACAAA AAACGGTGAT
AGTGGGATGT TGGTGAATAC GGCTTTGCTG CCGGATGCGG CCAATTCAAA CATTACCTCC
ATTGGCGGCA AGGGCAAAGA CTTCTGGGTG TTTGGTACCA ATTATACCAA TGATCCTAAA
CCGGGCACGG ATGAAGCATT GGAACGTGGA GAATGGCGTG TGGAAATCAC TCCAAAAAAG
GCAGCAGCCG AAGATTACTA CCTGAATGTG ATACAGATTG CCGACAATAC ACAGCAAAAA
TTACACGAGG TGAAGCGTAT TGACGGTGAC AAGGTTGTTG GTGTGCAGCT TGCTGACAGG
ATAGTTACTT TTAGCAAAAC TTCAGAAACT GTTGATCGTC CCTTTGGCTT TTCCGTTGTT
GGTAAAGGAA CATTCAAATT TGTGATGACC GATCTTTTAC CCGGTACCTG GCAGGTGCTG
AAAGACGGAA AAATACTTTA TCCTGCGCTT TCTGCCAAAG GTGATGATGG AGCCCTTTAT
TTTGAAGGAA CTGAAGGAAC CTACCGTTTT TTGAGATAA
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| Protein sequence | MKRQLYLYVI FVVVELMVFT TKGYSQTKAD VVWKDVDGVS MPIPPKTHPR LYLREQQVPD
LKNRMNDPKL KKVWADMIKM QEDWKPADIP EVKDFRFYFN QKGLTVRVEL MALNYLMTKD
PKVGREAITS IIDTLETATF KPAGDISRGI GLFMVTGAIV YDWCYDQLKP EEKTRFVKAF
VRLAKMLECG YPPVKDKSIV GHASEWMIMR DLLSVGIAIY DEFPEMYNLA AGRFFKEHLV
ARNWFYPSHN YHQGMSYLNV RFTNDLFALW ILDRMGAGNV FNPGQQFILY DAIYKRRPDG
QILAGGDVDY SRKKPKYYTM PALLAGSYYK DEYLNYEFLK DPNVEPHCKL FEFLWRDTQL
GSRKPDDLPL SRYSGSPFGW MIARTGWGPE SVIAEMKVNE YSFLNHQHQD AGAFQIYYKG
PLAIDAGSYT GSSGGYNSPH NKNFFKRTIA HNSLLIYDPK ETFSSSGYGG SDHTDFAAND
GGQRLPGKGW IAPRDLKEML AGDFRTGKIL AQGFGPDNQT PDYTYLKGDI TAAYSAKVKE
VKRSFLFLNL KDAKVPAAMI VFDKVVASNP DFKKFWLLHS IEQPEIKGNQ ITIKRTKNGD
SGMLVNTALL PDAANSNITS IGGKGKDFWV FGTNYTNDPK PGTDEALERG EWRVEITPKK
AAAEDYYLNV IQIADNTQQK LHEVKRIDGD KVVGVQLADR IVTFSKTSET VDRPFGFSVV
GKGTFKFVMT DLLPGTWQVL KDGKILYPAL SAKGDDGALY FEGTEGTYRF LR
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