101 homologs were found in PanDaTox collection
for query gene CPR_0268 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_0277  AbrB family transcriptional regulator  100 
 
 
79 aa  157  4e-38  Clostridium perfringens ATCC 13124  Bacteria  unclonable  0.00000000039637  n/a   
 
 
-
 
NC_008262  CPR_0268  AbrB family transcriptional regulator  100 
 
 
79 aa  157  4e-38  Clostridium perfringens SM101  Bacteria  unclonable  0.0000000000426571  n/a   
 
 
-
 
NC_010320  Teth514_0062  AbrB family transcriptional regulator  82.28 
 
 
83 aa  141  3e-33  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000163043  n/a   
 
 
-
 
NC_012034  Athe_0173  transcriptional regulator, AbrB family  82.28 
 
 
80 aa  137  3.9999999999999997e-32  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000901689  n/a   
 
 
-
 
NC_009012  Cthe_2100  AbrB family transcriptional regulator  82.28 
 
 
79 aa  135  2e-31  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.00000000000145229  n/a   
 
 
-
 
NC_008346  Swol_0047  transcription regulator AbrB  81.01 
 
 
83 aa  134  4e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000208345  n/a   
 
 
-
 
NC_011898  Ccel_0164  transcriptional regulator, AbrB family  81.01 
 
 
79 aa  134  6.0000000000000005e-31  Clostridium cellulolyticum H10  Bacteria  unclonable  0.000000000069654  n/a   
 
 
-
 
NC_013205  Aaci_0127  transcriptional regulator, AbrB family  73.42 
 
 
80 aa  127  6e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000836565  n/a   
 
 
-
 
NC_007644  Moth_0047  AbrB family transcriptional regulator  70.89 
 
 
85 aa  126  1.0000000000000001e-28  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000000000190016  hitchhiker  0.0000032494 
 
 
-
 
NC_011898  Ccel_3070  transcriptional regulator, AbrB family  74.36 
 
 
81 aa  125  3e-28  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3312  transcriptional regulator, AbrB family  74.36 
 
 
81 aa  125  3e-28  Clostridium cellulolyticum H10  Bacteria  normal  0.101256  n/a   
 
 
-
 
NC_009253  Dred_0064  AbrB family transcriptional regulator  72.73 
 
 
86 aa  123  8.000000000000001e-28  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.0000000448918  n/a   
 
 
-
 
NC_010424  Daud_0040  AbrB family transcriptional regulator  74.03 
 
 
84 aa  122  2e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0507223  n/a   
 
 
-
 
NC_013385  Adeg_2116  transcriptional regulator, AbrB family  74.03 
 
 
89 aa  121  3e-27  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000158986  n/a   
 
 
-
 
NC_010718  Nther_0042  transcriptional regulator, AbrB family  73.42 
 
 
83 aa  120  4e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0105  transcriptional regulator, AbrB family  76.71 
 
 
86 aa  119  1.9999999999999998e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000000445761  unclonable  0.000000000174996 
 
 
-
 
NC_011899  Hore_05890  transcriptional regulator, AbrB family  68.83 
 
 
80 aa  117  3.9999999999999996e-26  Halothermothrix orenii H 168  Bacteria  unclonable  5.83606e-19  n/a   
 
 
-
 
NC_011830  Dhaf_0065  transcriptional regulator, AbrB family  73.97 
 
 
89 aa  117  6e-26  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  1.25498e-17  n/a   
 
 
-
 
NC_011899  Hore_06360  transcriptional regulator, AbrB family  63.64 
 
 
86 aa  111  3e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000168493  n/a   
 
 
-
 
NC_011898  Ccel_3130  transcriptional regulator, AbrB family  57.69 
 
 
80 aa  103  1e-21  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2936  transcriptional regulator, AbrB family  57.14 
 
 
84 aa  101  3e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000000614981  normal 
 
 
-
 
NC_010001  Cphy_3909  AbrB family transcriptional regulator  59.49 
 
 
85 aa  98.6  3e-20  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0032  transcriptional regulator, AbrB family  74.19 
 
 
99 aa  94  6e-19  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0030  transcriptional regulator, AbrB family  72.58 
 
 
99 aa  91.7  3e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0032  AbrB family transcriptional regulator  74.19 
 
 
94 aa  91.3  4e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.136395  n/a   
 
 
-
 
NC_003909  BCE_0035  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.9  5e-18  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0033  transition state transcriptional regulatory protein  74.19 
 
 
94 aa  90.9  5e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0033  transition state transcriptional regulatory protein  74.19 
 
 
94 aa  90.9  5e-18  Bacillus cereus E33L  Bacteria  normal  0.0493749  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0032  AbrB family transcriptional regulator  74.19 
 
 
94 aa  90.9  5e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0046  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.9  5e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0042  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.9  5e-18  Bacillus cereus B4264  Bacteria  normal  0.807396  n/a   
 
 
-
 
NC_011772  BCG9842_B5274  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.9  5e-18  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0042  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.9  5e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0036  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.5  6e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0034  transition state transcriptional regulatory protein AbrB  74.19 
 
 
94 aa  90.5  6e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007105  pE33L54_0021  transition state regulatory protein  66.13 
 
 
92 aa  85.5  2e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0618  transcriptional regulator, AbrB family  50 
 
 
83 aa  84.7  4e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000296518  n/a   
 
 
-
 
NC_011658  BCAH187_A2217  transition state regulatory protein AbrB  60 
 
 
92 aa  83.6  8e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011777  BCAH820_B0194  transition state regulatory protein AbrB  67.8 
 
 
92 aa  81.6  0.000000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_1204  transcriptional regulator, AbrB family  47.44 
 
 
82 aa  81.3  0.000000000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000054071  n/a   
 
 
-
 
NC_011725  BCB4264_A2600  transition state regulatory protein AbrB  59.02 
 
 
92 aa  80.9  0.000000000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2724  transition state regulatory protein AbrB  60 
 
 
92 aa  79.7  0.00000000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.00162837  hitchhiker  0.00326326 
 
 
-
 
NC_011775  BCG9842_0059  transition state regulatory protein AbrB  60.32 
 
 
92 aa  79  0.00000000000002  Bacillus cereus G9842  Bacteria  normal  0.0251658  n/a   
 
 
-
 
NC_013385  Adeg_0487  transcriptional regulator, AbrB family  41.98 
 
 
83 aa  76.3  0.0000000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00969946  n/a   
 
 
-
 
NC_005707  BCE_A0235  transition state regulatory protein, AbrB  64.41 
 
 
92 aa  75.9  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.0146221  n/a   
 
 
-
 
NC_011772  BCG9842_B2375  transition state regulatory protein AbrB  56.45 
 
 
93 aa  75.1  0.0000000000003  Bacillus cereus G9842  Bacteria  normal  0.371411  normal 
 
 
-
 
NC_013206  Aaci_3032  transcriptional regulator, AbrB family  39.74 
 
 
90 aa  74.7  0.0000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011655  BCAH187_C0187  transition state regulatory protein AbrB  64.41 
 
 
92 aa  74.7  0.0000000000004  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000321307  hitchhiker  2.32472e-39 
 
 
-
 
NC_011772  BCG9842_B2883  transition state regulatory protein AbrB  53.23 
 
 
92 aa  73.2  0.000000000001  Bacillus cereus G9842  Bacteria  normal  normal  0.394279 
 
 
-
 
NC_011725  BCB4264_A2453  transition state regulatory protein AbrB  51.61 
 
 
92 aa  72  0.000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1244  transcriptional regulator, AbrB family  66.67 
 
 
172 aa  71.2  0.000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.35967  normal 
 
 
-
 
NC_009674  Bcer98_1839  AbrB family transcriptional regulator  58.06 
 
 
92 aa  71.2  0.000000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0045089  n/a   
 
 
-
 
NC_011725  BCB4264_A2002  putative transition state transcriptional regulatory protein  58.06 
 
 
95 aa  70.9  0.000000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3307  putative transition state transcriptional regulatory protein  58.06 
 
 
95 aa  70.9  0.000000000006  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000282754 
 
 
-
 
NC_010184  BcerKBAB4_1863  AbrB family transcriptional regulator  56.45 
 
 
95 aa  70.5  0.000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0995656  n/a   
 
 
-
 
NC_003909  BCE_2077  transition state transcriptional regulatory protein, putative  56.45 
 
 
95 aa  69.3  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.029146  n/a   
 
 
-
 
NC_005945  BAS1858  transition state transcriptional regulatory protein  56.45 
 
 
95 aa  69.3  0.00000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.52967  n/a   
 
 
-
 
NC_005957  BT9727_1828  transition state regulatory protein, abrB  56.45 
 
 
95 aa  69.3  0.00000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1812  transition state regulatory protein  56.45 
 
 
95 aa  69.3  0.00000000001  Bacillus cereus E33L  Bacteria  normal  0.950306  n/a   
 
 
-
 
NC_007530  GBAA_2000  transition state transcriptional regulatory protein  56.45 
 
 
95 aa  69.3  0.00000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.485699  n/a   
 
 
-
 
NC_011658  BCAH187_A2097  putative transition state transcriptional regulatory protein  56.45 
 
 
95 aa  69.3  0.00000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.000136428  n/a   
 
 
-
 
NC_012034  Athe_1006  transcriptional regulator, AbrB family  64.71 
 
 
183 aa  69.7  0.00000000001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000308031  n/a   
 
 
-
 
NC_008346  Swol_0080  AbrB family transcriptional regulator  66.67 
 
 
186 aa  69.3  0.00000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0595  AbrB family transcriptional regulator  66.67 
 
 
183 aa  68.9  0.00000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0068  transcriptional regulator, AbrB family  66.67 
 
 
184 aa  68.9  0.00000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0133  transcriptional regulator, AbrB family  66.67 
 
 
180 aa  68.9  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000474992  n/a   
 
 
-
 
NC_011898  Ccel_3088  transcriptional regulator, AbrB family  64.71 
 
 
184 aa  68.6  0.00000000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000437828  n/a   
 
 
-
 
NC_007644  Moth_0083  AbrB family transcriptional regulator  66.67 
 
 
183 aa  68.6  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0165891  normal 
 
 
-
 
NC_009253  Dred_0113  AbrB family transcriptional regulator  66.67 
 
 
186 aa  68.2  0.00000000003  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000111816  n/a   
 
 
-
 
NC_010001  Cphy_0127  AbrB family transcriptional regulator  66.67 
 
 
181 aa  68.2  0.00000000003  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.00000000412675  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0049  AbrB family transcriptional regulator  64.71 
 
 
178 aa  68.2  0.00000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0216  transcriptional regulator, AbrB family  66.67 
 
 
186 aa  68.2  0.00000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.643498  normal 
 
 
-
 
NC_003909  BCE_0052  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0053  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0049  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0049  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0053  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2655  AbrB family transcriptional regulator  64.71 
 
 
183 aa  67.8  0.00000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0063  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0059  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5257  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0060  stage V sporulation protein T  64.71 
 
 
178 aa  67.8  0.00000000005  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_0183  transcriptional regulator, AbrB family  46.67 
 
 
180 aa  67.8  0.00000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0049  AbrB family transcriptional regulator  64.71 
 
 
178 aa  67.4  0.00000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0051  transcriptional regulator, AbrB family  64.71 
 
 
178 aa  67.4  0.00000000006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_2071  transcriptional regulator, AbrB family  64.71 
 
 
183 aa  67.4  0.00000000006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0049  transcriptional regulator, AbrB family  64.71 
 
 
178 aa  67.4  0.00000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_0073  AbrB family transcriptional regulator  64.71 
 
 
186 aa  67  0.00000000008  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.266096  n/a   
 
 
-
 
NC_006274  BCZK1724  transition state regulatory protein  46.43 
 
 
93 aa  66.2  0.0000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2992  AbrB family transcriptional regulator  43.75 
 
 
87 aa  66.6  0.0000000001  Clostridium phytofermentans ISDg  Bacteria  normal  0.828454  n/a   
 
 
-
 
NC_011773  BCAH820_2034  putative transition state transcriptional regulatory protein  54.84 
 
 
95 aa  66.2  0.0000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.4093800000000004e-30 
 
 
-
 
NC_011899  Hore_21190  transcriptional regulator, AbrB family  62.75 
 
 
185 aa  66.6  0.0000000001  Halothermothrix orenii H 168  Bacteria  normal  0.609479  n/a   
 
 
-
 
NC_008261  CPF_2805  stage V sprulation protein T  62.75 
 
 
182 aa  65.5  0.0000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2491  stage V sprulation protein T  62.75 
 
 
182 aa  65.5  0.0000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0598  transcriptional regulator, AbrB family  39.58 
 
 
82 aa  44.7  0.0004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK3410  prophage LambdaBa01, AbrB family transcriptional regulator  28 
 
 
91 aa  43.5  0.0008  Bacillus cereus E33L  Bacteria  normal  0.648162  n/a   
 
 
-
 
NC_005945  BAS3787  prophage LambdaBa02, AbrB family transcriptional regulator  29.33 
 
 
91 aa  43.1  0.001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4076  prophage lambdaba02, AbrB family transcriptional regulator  29.33 
 
 
91 aa  43.1  0.001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3492  prophage LambdaBa01, AbrB family transcriptional regulator  28 
 
 
91 aa  42.7  0.002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000250344  n/a   
 
 
-
 
NC_007530  GBAA_3769  prophage lambdaba01, AbrB family transcriptional regulator  28 
 
 
91 aa  42.7  0.002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00000957175  n/a   
 
 
-
 
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