Gene CPR_2491 details

Gene Information

• Locus tag: CPR_2491
• Symbol: spoVT
• ID: 4205469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2704869
• End bp: 2705417
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642567041
• Product: stage V sprulation protein T
• Protein accession: YP_699738
• Protein GI: 110802184
• COG category: [K] Transcription
• COG ID: [COG2002] Regulators of stationary/sporulation gene expression
• TIGRFAM ID: [TIGR01439] looped-hinge helix DNA binding domain, AbrB family; [TIGR02851] stage V sporulation protein T

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCTA CTGGAATAGT AAGACGTATT GATGATTTAG GTAGAGTTGT AATACCTAAG 
GAAATAAGAA GAACTTTAAG AATAAGAGAA GGAGATCCTT TAGAAATCTT TACTGATAGA 
GATGGTGGAG TAATATTAAA AAAATACTCA CCAATAGGGG AACTAACAGA TTTTTCAAAG 
GAATATGCTG AAGCTCTACA ACAATCTACA GGACACATAA TTCTGATATC AGATAATGAT 
GCATTTATAT CTGTAAGTGG AACTTCTAAA AAAGAGTTTT TAGAAAGAAA AATAAGTGAT 
GAGTTAGAAG ATATAATGGA TAAGAGAAAA TCAGTAGTAT TAAGTGCTAC TAATAAAAAC 
TTAATACCAA TCCATGGTGA CGATGATGAA AGTAAATATA GTGGGCAGGT TATAGCACCT 
ATATTAGCTG AGGGTGACGC TATAGGGTCT GTAGTTATAC TTTCTAAAGA AGGTAAAGCT 
TTAGGAGAGG TTGAACAAAA ACTAGCAGAA ACAGCAGCTG CGTTCTTAGG CAAACAAATG 
GAACAATAA 

 

Protein sequence

MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFTDR DGGVILKKYS PIGELTDFSK 
EYAEALQQST GHIILISDND AFISVSGTSK KEFLERKISD ELEDIMDKRK SVVLSATNKN 
LIPIHGDDDE SKYSGQVIAP ILAEGDAIGS VVILSKEGKA LGEVEQKLAE TAAAFLGKQM 
EQ