Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2655 |
Symbol | |
ID | 4808966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3136848 |
End bp | 3137399 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640108068 |
Product | AbrB family transcriptional regulator |
Protein accession | YP_001039047 |
Protein GI | 125975137 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family [TIGR02851] stage V sporulation protein T |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGCAA CCGGGATAGT TAGAAGGATA GATGACCTCG GAAGAGTGGT AATCCCGAAG GAAATCAGAA GAACTTTAAG AATCAGGGAA GGCGACCCTC TGGAAATATT TACTGATAGA GAAGGTGAAG TAATATTAAA GAAATATTCG CCAATTGGTG AATTAAGTGA CTTTGCCGCT CAATATGCCG AATCTCTGCA TAAGACAAGT GGCCATATTA CCTGTATTTC AGATAGAGAT ACGATAATTG CGGTTTCGGG AGCCTCAAAG AAAGAGTATC TTGAGAAATC TTTAAGTCCG GAGCTTGAAA AAGTAATAGA AGAAAAGACC ACTTTAATTG TAAAAGCACC TGAAGAAAAA CCTATAAGCA TTTTAGCCGA CGAATCAGGT GAAAAATACT ATTCACAAGT AGTTACTCCG ATTATTTCAG AAGGCGACCC GATTGGGGCG GTAATATTCC TGTCAACGGA TCCTGATGTT CGCATGGGTG AAGTTGAGGC AAAACTCGCT CAGTCGGCTG CAGGTTTCCT GGGAAAGCAG ATGGAGCAAT AA
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Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFTDR EGEVILKKYS PIGELSDFAA QYAESLHKTS GHITCISDRD TIIAVSGASK KEYLEKSLSP ELEKVIEEKT TLIVKAPEEK PISILADESG EKYYSQVVTP IISEGDPIGA VIFLSTDPDV RMGEVEAKLA QSAAGFLGKQ MEQ
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