Gene Cthe_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2655 
Symbol 
ID4808966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3136848 
End bp3137399 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content41% 
IMG OID640108068 
ProductAbrB family transcriptional regulator 
Protein accessionYP_001039047 
Protein GI125975137 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCAA CCGGGATAGT TAGAAGGATA GATGACCTCG GAAGAGTGGT AATCCCGAAG 
GAAATCAGAA GAACTTTAAG AATCAGGGAA GGCGACCCTC TGGAAATATT TACTGATAGA
GAAGGTGAAG TAATATTAAA GAAATATTCG CCAATTGGTG AATTAAGTGA CTTTGCCGCT
CAATATGCCG AATCTCTGCA TAAGACAAGT GGCCATATTA CCTGTATTTC AGATAGAGAT
ACGATAATTG CGGTTTCGGG AGCCTCAAAG AAAGAGTATC TTGAGAAATC TTTAAGTCCG
GAGCTTGAAA AAGTAATAGA AGAAAAGACC ACTTTAATTG TAAAAGCACC TGAAGAAAAA
CCTATAAGCA TTTTAGCCGA CGAATCAGGT GAAAAATACT ATTCACAAGT AGTTACTCCG
ATTATTTCAG AAGGCGACCC GATTGGGGCG GTAATATTCC TGTCAACGGA TCCTGATGTT
CGCATGGGTG AAGTTGAGGC AAAACTCGCT CAGTCGGCTG CAGGTTTCCT GGGAAAGCAG
ATGGAGCAAT AA
 
Protein sequence
MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFTDR EGEVILKKYS PIGELSDFAA 
QYAESLHKTS GHITCISDRD TIIAVSGASK KEYLEKSLSP ELEKVIEEKT TLIVKAPEEK
PISILADESG EKYYSQVVTP IISEGDPIGA VIFLSTDPDV RMGEVEAKLA QSAAGFLGKQ
MEQ