Gene GWCH70_0051 details

Gene Information

• Locus tag: GWCH70_0051
• ID: 7978489
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 62530
• End bp: 63066
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644797011
• Product: transcriptional regulator, AbrB family
• Protein accession: YP_002948259
• Protein GI: 239825635
• COG category: [K] Transcription
• COG ID: [COG2002] Regulators of stationary/sporulation gene expression
• TIGRFAM ID: [TIGR01439] looped-hinge helix DNA binding domain, AbrB family; [TIGR02851] stage V sporulation protein T

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCAA CTGGTATTGT TCGCCGAATT GATGATTTAG GAAGGGTTGT CATTCCGAAA 
GAAATTCGAA GAACGTTGCG TATCCGAGAA GGGGACCCGC TTGAAATATT TGTTGACCGT 
GACGGAGAAG TTATTTTAAA AAAATATTCG CCAATTAGTG AATTAGGTGA TTTTGCAAAA 
GAATATGCAG AGGCGTTGTT TGACAGTTTA GGACAGCCTG TGTTGATTTG CGACCGAGAT 
GTTTTTATTG CAGTAGCGGG TGTTTCGAAA AAAGAATATT TGAACAAAAA TGTCGGTCCA 
TTAGTGGAAA AAGCGATGGA AGAACGAAAT TCTGTCCTTC ACACAGAAGA AGGAGAGACC 
GAACTCGTTG ACGGAGTTTC TGAAATGTTA AAATCGTATA CAATTGGACC GATTGTAGCA 
AACGGAGATC CGATTGGCGC CGTTGTCATT TTATCAAAAG ATAAAGTGCT TGGTGAAGTA 
GAACATAAAG CAGTCGAAAC AGCTGCTAGC TTCTTGGCTC GACAAATGGA GCAATAG 

 

Protein sequence

MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR DGEVILKKYS PISELGDFAK 
EYAEALFDSL GQPVLICDRD VFIAVAGVSK KEYLNKNVGP LVEKAMEERN SVLHTEEGET 
ELVDGVSEML KSYTIGPIVA NGDPIGAVVI LSKDKVLGEV EHKAVETAAS FLARQMEQ