Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0068 |
Symbol | |
ID | 6317201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 84784 |
End bp | 85338 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642642440 |
Product | transcriptional regulator, AbrB family |
Protein accession | YP_001916255 |
Protein GI | 188584710 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family [TIGR02851] stage V sporulation protein T |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCAA CCGGCATTGT TCGCAGAATA GATGATCTGG GCAGGGTAGT TATACCAAAA GAAATCAGAA GGACTTTGAG AATAAGAGAA GGTGATCCCC TGGAGATTTT CGTTGACCGA GAAGGGGAAG TGATATTAAA AAAATATTCT CCAATAGGTG AATTGGGAGA ATTTGCAGAG GAATATGTTG AATCAATTCA TGAAACTACC GGACATATAG CATGTATATC TGATCGAGAT ATGATTATCT CAGTTGCTGG GACTGCAAAA AAAGAATTTT TAAATCGTCC ACTATCACCT GCTGTGGATA GGGCTATGGA AGAGCGGCAA TCAGTGAAAA TTGAAGATTC AGCAGATCAT CCCTACTATC AAGAAGCTGA AGATGAGCAG AGAAGTAGAT TTAAATCAGA AGTCATTGCC CCTATAATTG CCCAGGGAGA TGCTATCGGT GCTGTAATAA TTGGTACTAA AGAAAAAGAT TATACAATGA CAGATCAGGA ATTAAAAATT GCAGAAACCG CAGCAGGATT TTTAGCAAAA CAAATGGAAC AGTAA
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Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR EGEVILKKYS PIGELGEFAE EYVESIHETT GHIACISDRD MIISVAGTAK KEFLNRPLSP AVDRAMEERQ SVKIEDSADH PYYQEAEDEQ RSRFKSEVIA PIIAQGDAIG AVIIGTKEKD YTMTDQELKI AETAAGFLAK QMEQ
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