Gene Athe_1006 details

Gene Information

• Locus tag: Athe_1006
• ID: 7407908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerocellum thermophilum DSM 6725
• Kingdom: Bacteria
• Replicon accession: NC_012034
• Strand: -
• Start bp: 1103936
• End bp: 1104487
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643715371
• Product: transcriptional regulator, AbrB family
• Protein accession: YP_002572880
• Protein GI: 222528998
• COG category: [K] Transcription
• COG ID: [COG2002] Regulators of stationary/sporulation gene expression
• TIGRFAM ID: [TIGR01439] looped-hinge helix DNA binding domain, AbrB family; [TIGR02851] stage V sporulation protein T

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000308031
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCAA CAGGGATTGT AAGAAGAATT GATGATTTGG GAAGAGTTGT AATCCCGAAA 
GAAATAAGAA GAACTCTTAA AATCAGAGAA GGTGACCCGC TTGAAATATA TACCGATAAC 
GAAGGTGAGG TAATCTTAAG GAAATATTCA CCGATAGGCG AAATGGGAGC ATTTGCCAAA 
GAATATGCTG AAACACTTCA TCAGGTAAGT GGACATATCA TAATTATCAC TGATAGAGAT 
AGAGTAATTG CTGTTGCAGG TGCTTCTAAA AAGGATTATA TGGATAAGCC TTTGAGCCAA 
GAACTGGAAA GGGTGATAGA AGAAAATTCT ATTGTTGTTG TGAAATCTGA AAATGACATG 
AGCAGCATAC CGATTGTCGA AGGTGACACA ACAAGATATA CTGCGCAGAT AGTAAGTCCT 
ATACTTTCCG AAGGAAGTGT AATCGGTAGC GTGATTATGT GTTCAACACA ATCCAATGTT 
GTTATGGGTG ACTCAGAGTA CAAGCTTGTT CAAGCTGCAA CATCTTTTTT CGGAAAACAG 
CTTGAACAGT AG 

 

Protein sequence

MKATGIVRRI DDLGRVVIPK EIRRTLKIRE GDPLEIYTDN EGEVILRKYS PIGEMGAFAK 
EYAETLHQVS GHIIIITDRD RVIAVAGASK KDYMDKPLSQ ELERVIEENS IVVVKSENDM 
SSIPIVEGDT TRYTAQIVSP ILSEGSVIGS VIMCSTQSNV VMGDSEYKLV QAATSFFGKQ 
LEQ