Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0183 |
Symbol | |
ID | 8423649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 202305 |
End bp | 202847 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645026292 |
Product | transcriptional regulator, AbrB family |
Protein accession | YP_003183635 |
Protein GI | 258510201 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family [TIGR02851] stage V sporulation protein T |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGCCA CAGGCATCGT GCGGAGAATT GATGATCTCG GTCGGGTTGT GATTCCGAAG GAAATTCGAC GGACGTTGCG CATTCGCGAA GGCGATCCCT TAGAGATATT CGTGGACCGC GACGGCGAGG TCATCCTGAA GAAGTATTCG CCCATCGGAG AACTCGGGGA CTTTGCCAAG GAGTATGCGG ATTCGCTCGC CGAAAACACG GGGCACATCG CGATGATTGC GGATCGGGAC GTGATCATCG CCGTGTCGGG GGCGCCGAAG AAGGAGTTTT TGGACAAGCC TGTGAGCGAA GACATCGAAC AGGCGATGGA GGAGCGGAAA ACGGTACACA ATTCGGCGGC GGGGGAGTAC GCCATCGTGC GGGATCGCCC GGAGCGATTC GGCGCGCGCG TCATCGCGCC CATCATCGCC GCAGGCGATC CGATTGGCGC GGTCATCCTC GCCACCCGCG ACGAGAGCGT GCGGATGGGG GAGACCGAGG TCAAGTTGGC GGAAACGGCC GCCGGCTTTT TGGGTAAGCA AATGGAGCAA TAA
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Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR DGEVILKKYS PIGELGDFAK EYADSLAENT GHIAMIADRD VIIAVSGAPK KEFLDKPVSE DIEQAMEERK TVHNSAAGEY AIVRDRPERF GARVIAPIIA AGDPIGAVIL ATRDESVRMG ETEVKLAETA AGFLGKQMEQ
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