Gene Aaci_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0183 
Symbol 
ID8423649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp202305 
End bp202847 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID645026292 
Producttranscriptional regulator, AbrB family 
Protein accessionYP_003183635 
Protein GI258510201 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCCA CAGGCATCGT GCGGAGAATT GATGATCTCG GTCGGGTTGT GATTCCGAAG 
GAAATTCGAC GGACGTTGCG CATTCGCGAA GGCGATCCCT TAGAGATATT CGTGGACCGC
GACGGCGAGG TCATCCTGAA GAAGTATTCG CCCATCGGAG AACTCGGGGA CTTTGCCAAG
GAGTATGCGG ATTCGCTCGC CGAAAACACG GGGCACATCG CGATGATTGC GGATCGGGAC
GTGATCATCG CCGTGTCGGG GGCGCCGAAG AAGGAGTTTT TGGACAAGCC TGTGAGCGAA
GACATCGAAC AGGCGATGGA GGAGCGGAAA ACGGTACACA ATTCGGCGGC GGGGGAGTAC
GCCATCGTGC GGGATCGCCC GGAGCGATTC GGCGCGCGCG TCATCGCGCC CATCATCGCC
GCAGGCGATC CGATTGGCGC GGTCATCCTC GCCACCCGCG ACGAGAGCGT GCGGATGGGG
GAGACCGAGG TCAAGTTGGC GGAAACGGCC GCCGGCTTTT TGGGTAAGCA AATGGAGCAA
TAA
 
Protein sequence
MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR DGEVILKKYS PIGELGDFAK 
EYADSLAENT GHIAMIADRD VIIAVSGAPK KEFLDKPVSE DIEQAMEERK TVHNSAAGEY
AIVRDRPERF GARVIAPIIA AGDPIGAVIL ATRDESVRMG ETEVKLAETA AGFLGKQMEQ