Gene Daud_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0073 
Symbol 
ID6025396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp77857 
End bp78417 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content55% 
IMG OID641592926 
ProductAbrB family transcriptional regulator 
Protein accessionYP_001716273 
Protein GI169830291 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.266096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAA CCGGCATTGT CCGCCGCATT GACGATTTGG GAAGGGTGGT TATCCCGAAA 
GAAATCAGAC GGACCTTAAG GATCCGAGAA GGAGACCCTC TAGAGATTTT TGTGGACCGT 
GACGGCGAAG TCATCCTAAA GAAATATTCC CCGATCGGGG AGCTCGGTGA TTTCGCCAAG 
GAATATGCCG ATTCTTTGTA TGAGGCAACC GGCCACATCG CCTGCATCGC GGACCGTGAC 
ACCATTATCG CCGTTTCCGG CGCACCCAAG AAAGAGTTTC TCAACAAACC GGTCGGTCCG 
GCCGTGGAAA AGGTGATGGA GGACCGCAAA CCCGTCATCA TCAACGCGCC CGGCGACGAG 
GCGCTTTGCA AGGAATGTCT GGCGGGTGAA AACGGCGAAT GCAAGTACAC CGCCGAGGTG 
ATCGCGCCGA TCATCTCCGA AGGGGACCCG ATCGGGGCGG TGATGTTGAT TTCCAGGGAA 
CCCGGAGCGA AGATGGGCCA GTTGGAGTTA AAACTTTCCG AAACGGCAGC AGGATTCCTG 
GCGAAACAAA TGGAACAATA A
 
Protein sequence
MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR DGEVILKKYS PIGELGDFAK 
EYADSLYEAT GHIACIADRD TIIAVSGAPK KEFLNKPVGP AVEKVMEDRK PVIINAPGDE 
ALCKECLAGE NGECKYTAEV IAPIISEGDP IGAVMLISRE PGAKMGQLEL KLSETAAGFL 
AKQMEQ