28 homologs were found in PanDaTox collection
for query gene Avi_3564 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_3564  bifunctional enzyme including aminotransferase and chitin synthase protein  100 
 
 
641 aa  1283    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2117  chitin synthase  37.1 
 
 
628 aa  334  3e-90  Dickeya dadantii Ech703  Bacteria  normal  0.110823  n/a   
 
 
-
 
NC_013421  Pecwa_2552  DegT/DnrJ/EryC1/StrS aminotransferase  38.36 
 
 
1003 aa  308  2.0000000000000002e-82  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2239  DegT/DnrJ/EryC1/StrS aminotransferase  33.44 
 
 
1023 aa  295  2e-78  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.716202  n/a   
 
 
-
 
NC_012880  Dd703_1390  chitin synthase  30.23 
 
 
573 aa  254  3e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
BN001303  ANIA_04566  Chitin synthase C (EC 2.4.1.16)(Chitin-UDP acetyl-glucosaminyl transferase C)(Class-I chitin synthase C) [Source:UniProtKB/Swiss-Prot;Acc:P30583]  26.27 
 
 
918 aa  150  7e-35  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0856181  normal  0.834607 
 
 
-
 
BN001304  ANIA_07032  Chitin synthase A (EC 2.4.1.16)(Chitin-UDP acetyl-glucosaminyl transferase A)(Class-II chitin synthase A) [Source:UniProtKB/Swiss-Prot;Acc:P30584]  24.78 
 
 
1013 aa  145  2e-33  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009042  PICST_29807  chitin synthase  24.34 
 
 
866 aa  141  3e-32  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.532192  normal 
 
 
-
 
NC_006692  CNG02520  chitin synthase 1, putative  25.79 
 
 
947 aa  141  3.9999999999999997e-32  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.616261  n/a   
 
 
-
 
NC_009044  PICST_65597  chitin synthase 2  24.83 
 
 
959 aa  140  4.999999999999999e-32  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.185541 
 
 
-
 
NC_009043  PICST_42812  chitin synthase  25.13 
 
 
997 aa  135  1.9999999999999998e-30  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.676694 
 
 
-
 
NC_006685  CNC00050  chitin synthase, putative  25.81 
 
 
1024 aa  130  8.000000000000001e-29  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.881569  n/a   
 
 
-
 
NC_009068  PICST_51281  chitin synthase 2.2  24.53 
 
 
1001 aa  129  2.0000000000000002e-28  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_006687  CNE03240  chitin synthase, putative  23.05 
 
 
755 aa  117  8.999999999999998e-25  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006683  CNN02110  chitin synthase, putative  23.37 
 
 
996 aa  100  6e-20  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001303  ANIA_04367  chitin synthase 2 (Eurofung)  24.82 
 
 
905 aa  94.4  6e-18  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
BN001307  ANIA_02523  Chitin synthase B (EC 2.4.1.16)(Chitin-UDP acetyl-glucosaminyl transferase B)(Class-III chitin synthase B) [Source:UniProtKB/Swiss-Prot;Acc:Q00757]  23.79 
 
 
916 aa  93.2  1e-17  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.154622 
 
 
-
 
NC_006670  CNA05300  chitin synthase 6, putative  25.33 
 
 
1271 aa  58.2  0.0000005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_011673  PHATRDRAFT_44759  transmembrane chitin synthase, glycosaminyl transferas  24.18 
 
 
904 aa  56.2  0.000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.611486  n/a   
 
 
-
 
NC_011682  PHATRDRAFT_37908  transmembrane chitin synthase  21.21 
 
 
933 aa  53.9  0.00001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.105855  n/a   
 
 
-
 
NC_006693  CNH02270  chitin synthase 4, putative  26.14 
 
 
1423 aa  52  0.00004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.240777  n/a   
 
 
-
 
NC_006692  CNG04660  chitin synthase 1, putative  26.34 
 
 
1236 aa  48.5  0.0004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001307  ANIA_01555  Chitin synthase D (EC 2.4.1.16)(Chitin-UDP acetyl-glucosaminyl transferase D)(Class-V chitin synthase D) [Source:UniProtKB/Swiss-Prot;Acc:P78611]  25.88 
 
 
1194 aa  48.5  0.0004  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.058533  normal  0.103858 
 
 
-
 
BN001301  ANIA_06317  Chitin synthase [Source:UniProtKB/TrEMBL;Acc:Q2L6A0]  26.34 
 
 
1739 aa  48.1  0.0005  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
BN001301  ANIA_06318  Chitin synthasePutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:O13281]  22.69 
 
 
1852 aa  47.8  0.0006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.15619  normal 
 
 
-
 
BN001308  ANIA_01046  hypothetical protein similar to chitin synthase class VII (Eurofung)  25.21 
 
 
739 aa  47  0.001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.661748 
 
 
-
 
BN001308  ANIA_00799  conserved hypothetical protein  23.29 
 
 
797 aa  47  0.001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.70319  normal  0.0518481 
 
 
-
 
NC_009068  PICST_29105  chitin-UDP acetyl-glucosaminyl transferase 3  23.14 
 
 
1202 aa  44.3  0.007  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.196175  hitchhiker  0.000301151 
 
 
-
 
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