| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_37908 |
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| Symbol | |
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| ID | 7202838 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | + |
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| Start bp | 373305 |
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| End bp | 376179 |
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| Gene Length | 2875 bp |
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| Protein Length | 933 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | transmembrane chitin synthase |
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| Protein accession | XP_002181895 |
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| Protein GI | 219123154 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.105855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAG AGAAAAAAAC AGAAAATACC TCTGTACCGG CTGAGCATAT GGATGCAGCT
GATCGGACGG TGCGATCAGG TATAGGCAGT GACGATACAG CAGAGCCAGT TGCAATGTCG
ACCTTTCTAA AACAAAATCG TTTAACAAAA AATGAGATTT CCACCGAATC AGTCAAAAGT
CAAGCGGACG TCTTGGGCGC CTTGGCTCGA TGTTCAATAG GAGGACAAAG AGAAACACAC
GCTGAAAATG TTTTATCTTC CGCTTCTACT GATAAATTGT CGATGTCGTT GGTCAAGGAC
GGCGCGACCA CAAACGCCTT GAATTTTCCA CTCTTTTCAG ACACTGGAAG TATTTCCGAA
TCCTCCGAGG AGCCTTGGGT GCAGGATTTG GAAGAAGTAC CGTTCGGTCA TGATGGCCAC
TCCGTCCAAA AGCAAGTCGC AGTGAAGGAA TACGATGTTG AAGCAACGTT TGAAAACAAC
GGGAGGAACA ATTGTATGGA AGTGAATGCC ATTGACATCG TTGATGATGA AATCTCCACT
AGCGCTAGTA GGATGAAGAT GTCTTCATCG AGAGTCCCCG TTTTGCGCAT CGAACGTGGT
GATATGCGCT GGTTGGCCCA CGGCTATAAA GAAATGTCTC CCTTATCGAA CAAAGTGTAC
TTTACATCGC TGGAAGCTAT GGACCGAGTC GTTGATAGAG AGTCTATCTC AGGCTTTGGA
CTATCTGGTG TTGCCAGCTC AAAACGTGTG ATATCGGTGT GCATACCTTG CTACAATGAG
GATGCGTCTG CCCTGAAGCG ATCGTTGACG TCACTTGCAA AGCAGAACCT TCCGGCCGAT
GTGACGATGG AGATTCTTGT TGCAATGGAT GGTGTGGTAC AATTGTCTGA CTCTATGGCG
GCATATCTAT CGGAGCTGTT TGGAATCAGC TTCATAGTTG GGCACGAGAA CAATCCTTTT
GAACGTCTTC AAACACCAAA CACTGTCGTA GTAGAGCCTA TATTCGAGGA CAAGAACATG
TTTGGTGCGA ACCTAGCGCT CTTGATCAAG AGAAAGAACC TCCGCAAGGT CAATTCTCAG
GAGTGGTGGC TTCGCTCACA TGCTCCAGCC TCTCTCTGTG AGTTTGCATT TGCCACAGAT
TGCGGCATCA CGTTTGATAC AAATTGTCTA CAACTGATGT TGAAACGTTT CGATATCGAC
CCCAACATGT CCGGCTTGAC CGGTTACCAG CGAGTAATGT CCGCTAAGAT GCAAGGTGAT
GGCAGGTTTG AGATTTTGAC TGACCCTGTA GGATGTTTCC TGCGCTTGCT ACAGAGTTAC
GATTTTGAGG TATGCGTCTG ATCGTTACGA TGAAAACATC CTTGAGCCAA TTCTAACCAG
CAGTCTTTCT CATTGTCTTT AGGTGAGCCA GTCCACAACA AAATCATTGT TGGACTCGAT
TGGTTTCATT CCAGTCCTTC CAGGTCCGTG TTCTTTCTTC CGTACAAAAC ACCTTCAAGG
AGTACTAGAC GAGTACTTCT CACTGACCAC GGAGACTATA AAGGGGGGTC GTGGAGGTAT
TGTTCTTGGG AATGTCCAAC TAGCAGAAGA TCGATTCCCT CCCGTACTTT TGACATTTCG
TTCCAAAGAC AGCTGTAAAG ATGCAGGGCT TGTTCGGCCG AAAACTGGTT TCGAACACGA
CGCAGTCTTC TACTTTGAAG CAGAAAAACC TTTACGTCAG CTTGTGACTC AGCGACGCAG
GTGGATTAAT GGAGCATACA CGGCTGTTTA CTGGGTGCTT TTGGATTCTT GGATTCGAAA
GGCCGACCAC TCCATTTTTA CCAAGCTGGG AGCAAGCTTA ATTCTCTTCA TTGAGTTTGC
GCAGGGAGCA TTGGTTCGCA CATGCGTTCC GGCCACTCTG GCGTGCGGAC TGATGTATAT
GTGCACCATT TTCCCTTCGG TGTATGCAAA CGACGCCGAA AAGGTTCGAG ATATTTTGGA
CGGAGGAACT GTTGAGCCTA GCCTCGTGGG TATCGGGGCA GCTGCTGCTT TCTTCTACCT
TTCTCTTTTT GCCGTCTTCA TTTTCTCCCA CACACCCCGT GCCATCCCGG TGACAGATGA
TAATGGAGAA GTGCACTGGA GGAGCGATAG CTCCAGCGCA TATCGCCCCC GCATATTCTT
TCTTGCCTTT GTTGTCAATG CAATTACAAT TGCTGTTTTT GTGTATGTTG GCGTGGGTGT
GTTCATGATT GTTGGCTGGC AAGGTACACC AGGATATTTT CAAGCGCTTT GTCTACTGAT
GGCGCTGCCA TATTTGGTGG CACTTATGGA TGGTTTGATC AACAGTGAAC GTCCAAACCT
ACGGGCCGTC TGGAACATGT TGATGCTGTT TCCTATCTTT CTGATCAGCT CTGTTTGGTT
TTACGTCTGG CTTCCTTGTT ACGCCAGTGC ACGCATTTCA GATCTATCTT GGGGAAATCG
GGATTGTAGC GGCCAATCTT GCAAAAGCAG CGATGTTGCC ATTTACAGGG CGTACCTTGG
GCGTGTTGTC AGTATTTCTT TGGTTATCAT CAACACGTTG CTCACGGGGT CGATTATTGG
AGTGGGTAAC TTTGTTGACG GATTCTTGAC CATTGTTTTA TTCTCCCTTC TCGTGCTTAA
CATGATGCTT CACTTGGGCA ACCTCTTGGA CATGCTGGTG AGGCTTTGCT TTACGCGTAT
TCCTCGTTGG GTGTGTGGAG AGGCTCCTGT CTATCTGAAA AAGCAAGATA ACGAAGTGAA
CAAGAGTGCA CCCGCTTCTG AAATTAGCAG CCACGATGAC GAAAGTGGAG ACGGATCAAT
TGCGAGCGAG TCACCGACAC CGATTGGGCC CGGTCGATGG AGAATTGACT TTTGA
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| Protein sequence | MAKEKKTENT SVPAEHMDAA DRTVRSGIGS DDTAEPVAMS TFLKQNRLTK NEISTESVKS
QADVLGALAR CSIGGQRETH AENVLSSAST DKLSMSLVKD GATTNALNFP LFSDTGSISE
SSEEPWVQDL EEVPFGHDGH SVQKQVAVKE YDVEATFENN GRNNCMEVNA IDIVDDEIST
SASRMKMSSS RVPVLRIERG DMRWLAHGYK EMSPLSNKVY FTSLEAMDRV VDRESISGFG
LSGVASSKRV ISVCIPCYNE DASALKRSLT SLAKQNLPAD VTMEILVAMD GVVQLSDSMA
AYLSELFGIS FIVGHENNPF ERLQTPNTVV VEPIFEDKNM FGANLALLIK RKNLRKVNSQ
EWWLRSHAPA SLCEFAFATD CGITFDTNCL QLMLKRFDID PNMSGLTGYQ RVMSAKMQGD
GRFEILTDPV GCFLRLLQSY DFEVSQSTTK SLLDSIGFIP VLPGPCSFFR TKHLQGVLDE
YFSLTTETIK GGRGGIVLGN VQLAEDRFPP VLLTFRSKDS CKDAGLVRPK TGFEHDAVFY
FEAEKPLRQL VTQRRRWING AYTAVYWVLL DSWIRKADHS IFTKLGASLI LFIEFAQGAL
VRTCVPATLA CGLMYMCTIF PSVYANDAEK VRDILDGGTV EPSLVGIGAA AAFFYLSLFA
VFIFSHTPRA IPVTDDNGEV HWRSDSSSAY RPRIFFLAFV VNAITIAVFV YVGVGVFMIV
GWQGTPGYFQ ALCLLMALPY LVALMDGLIN SERPNLRAVW NMLMLFPIFL ISSVWFYVWL
PCYASARISD LSWGNRDCSG QSCKSSDVAI YRAYLGRVVS ISLVIINTLL TGSIIGVGNF
VDGFLTIVLF SLLVLNMMLH LGNLLDMLVR LCFTRIPRWV CGEAPVYLKK QDNEVNKSAP
ASEISSHDDE SGDGSIASES PTPIGPGRWR IDF
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