Gene Dd703_2117 details

Gene Information

• Locus tag: Dd703_2117
• ID: 8088284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 2501475
• End bp: 2503361
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644836193
• Product: chitin synthase
• Protein accession: YP_002987726
• Protein GI: 242239545
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.110823
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACACA CACCCCCCGC AAGCCGGGAA TATACGCCTC CCGTGCCGGT GCCTTACCCC 
GGACGAACAG CCACCTGCAT CAGGCAAAAT ATGTGGCTAT CCGGCCCGGA ATTGCCGCTC 
CGCAGCCACG TTACCGCCTG CATTACGCTG TACAACGAAC CCCTGCGGGT TTTATTGCCG 
ACGCTCATCT CGCTTATCGA AAACCATCAT CACATGAAAA CACGCCGGCC GGCCGGGGAA 
CCGTTGGTGT CGTGCCTCCT GATTGATGGC GAGGCGCATC TTCACCCGGA GGTTAGGGCG 
CTGCTGCTTG CGCTGGGTTG GACGCCGTCT TTTCCTGCGG CCCCGTCGGA CGACAACAGC 
GTCCATATTC AGCACCTCTC CCTGTCTCTG GATACGCTCC ATACGGCGCT GAATCTCCCC 
GCCGACGGCG ATGCGCGCCC GATGCCCCTG CTGATTGCCG CCAAACAACA CAACCGCGGC 
AAGTTGGATT CGCACGCCTG GTTTTTCCGC CATATCTGCC GCCTTATTAC GCCGGACTAT 
ATTTTGCAGA TCGACGCCGG TTCCATTCCT GCTGCGAATT GTCTGCCGCT ATTACTGGAT 
CACATGGCGC TGCGCCCCGA CTGCGGCGCG CTGGCGGCCA GAATCGTTAC ACGCCCGCCG 
TCGGGGCTCA ACCCGGTAAC GAACTGGCAA TATGGCGATT TTATCTGGGA AAAAATAACC 
GACTGGCCGG TCAGCAACTT GCTGCGCTAT ATGGAAGTGG TGCCGGGCCA GTGCAGCCTG 
ATTCGTTATT CCACGTTCTG CTCTTCCCAC GACGCCGTGG CAACGCCCAT GCATCGCTAT 
TTACGCGGTC TGGCTGCGCA AGGGTTGCTC GAACGCAATC AGTTTTTGGC CGAAGACCGG 
GTGCTGGGGT TTGAAATCGT TAACGCGCCA CACCATCAGG CCACCACCGA ATATGAGCCC 
AACGCCGTAC TGGAAACCGA TCCCTGCCCG ACGTTCGCCG AACTGGTACG TCAACGTCGC 
CGCTGGATCA ACAGCACGTT AGCCGTCAGG ATCGCTACGC TATCGGCGCT GCCGGCGCTA 
CTCCGGCATG CAGCGCTCTC GCCAATGCGT AAGCTGGAAA TCCTGCTGTC GATGCTGTGG 
AATTACAGCC AGTTGTTGAC GCTGTTTGTT TTCCCCGCGT TGATGGCGGT TATCTGCTCG 
TTGACCGTTA ACCGCCTGGT ACCGGCATCC ATGAATGGCT TGCCCGCATC GCAGCCGCTG 
GGTTCTTTCG CCGCCGGCGG ATTTATTCTG TTCTGGGCCG GCATCCTGCT GTGCAGCCGA 
ATTTACAGTG TGAGCAGCCC GTGGGGATTA CGCCTGCACC GACTCCTGGC TTCACTGTTG 
GCGGTGACAA TCAATCTGCT GTTAGTCACC GGCCCGGTGC TTCAGCTTTT TTGGCATTAT 
CCCGGCGGGT CGTTATCGCT GCTGGCGCTT GTATTACTGG CCGTTGCGCT GCATTCGCCC 
GATCATTTTC ATAATCTCTG GCGATTTATC CTGCTCTATT TCCCGCTGTT TACCTCTTTC 
AGTTTTTATC TCACCAGCTA TGCGCTGGCC AATTTCAGCG ATACCAGTTG GGGAACGAAG 
GGGCTTTTGC ATGGCAAAAC CACGCGGCGC TGGTCAATGA TTCGTGATGG TATGCTGATT 
TTCTGGGTTG TCGCCGCCAG CATCATGGCT GCCTGGGTCA TTGCGCTGGG CGAACAAGCC 
GCCGTGGCGG TCATTACCGG GATGGTTATT TTTACGCTGG CGCGTTATGT CGTGGCTATC 
TTGTGCAGCG TTTCCGCGCT GTTCCGCAAG CCGATCACGT TCGCGGAACG TTTCCCCTGG 
CGTCACCGTC TCGACGGTGA ACTCTAA 

 

Protein sequence

MRHTPPASRE YTPPVPVPYP GRTATCIRQN MWLSGPELPL RSHVTACITL YNEPLRVLLP 
TLISLIENHH HMKTRRPAGE PLVSCLLIDG EAHLHPEVRA LLLALGWTPS FPAAPSDDNS 
VHIQHLSLSL DTLHTALNLP ADGDARPMPL LIAAKQHNRG KLDSHAWFFR HICRLITPDY 
ILQIDAGSIP AANCLPLLLD HMALRPDCGA LAARIVTRPP SGLNPVTNWQ YGDFIWEKIT 
DWPVSNLLRY MEVVPGQCSL IRYSTFCSSH DAVATPMHRY LRGLAAQGLL ERNQFLAEDR 
VLGFEIVNAP HHQATTEYEP NAVLETDPCP TFAELVRQRR RWINSTLAVR IATLSALPAL 
LRHAALSPMR KLEILLSMLW NYSQLLTLFV FPALMAVICS LTVNRLVPAS MNGLPASQPL 
GSFAAGGFIL FWAGILLCSR IYSVSSPWGL RLHRLLASLL AVTINLLLVT GPVLQLFWHY 
PGGSLSLLAL VLLAVALHSP DHFHNLWRFI LLYFPLFTSF SFYLTSYALA NFSDTSWGTK 
GLLHGKTTRR WSMIRDGMLI FWVVAASIMA AWVIALGEQA AVAVITGMVI FTLARYVVAI 
LCSVSALFRK PITFAERFPW RHRLDGEL