| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29807 |
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| Symbol | CSH8 |
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| ID | 4837052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1219781 |
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| End bp | 1222381 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388367 |
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| Product | chitin synthase |
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| Protein accession | XP_001382451 |
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| Protein GI | 150863840 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.532192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTT CTGGTGACGA CTACTTAATT AATCCTTTAG AAGATGCTGA CGATGATGAC
GATCTTGATC CATTCGGGGA CGATGATTCG TTGTTCCTGG AAACCGGCGA AGAAATCGTT
AGAAGAGGCA CCACCATCAA GAGAAAGGAC ACCTTAGGCC GTAGAAACAC TACCAAGAGT
AAGCACTCAG GAGCTGTTGC ATTCGAAGAT GATTACGACT TCGACGACGA CGACTTCAAG
CCCAAGTTGA ACTACACGAA GACGATCAAG AGAGCCAGGC TCGTCAACGG GAACTACGTT
ATCGACGCTC CTGTTCCGCA AGCTCTATTG GACACATATG GTAAGAAGAT CGATGATAGC
GGCAGAGAAA TGTCGTTTAT GAGATACACA GCTGTCACCT GTGGCCCCTC AAACTTCATG
AACTTCAACT ACAACGTTAG ACAGGCATTG TATTCTCCAC CTCGTGAAAC GGAAATCATG
ATTTGTATCA CCATGTATAA CGAAGACGAG ATCTTGTTGG GGCGTACATT GAAGGGTGTA
TTTGACAACA TCAAAAACTT GACTAACAGA TCGGATCCCG TATGGGGGGA CGATTCGTGG
AAGAAAATCG TAGTTTGTAT TGTGAACGAT GGTAGACTCG AGTTGAACAA GAGAACTCAG
AAGTTATTGA CCGCACTTGG TGCGTTCCAG GATGGTTACG CCAAGTCTAA AATCAACGAC
CGTACCGTCA ATGCCCATCT CTACGAGTAC ACTTCCACTG TAGGCATCGA TGTAGTCAAC
GATAGAGTTC ACTTGTGTCC AAATTCAAAC CCCGTGCAGT TCATGTTCTG CCTCAAAGAA
AAGAATAGCA GAAAGATCAA CTCCCATAGA TGGTGTTTCC AGTCGTTTGC ACCTATCATC
AACCCCAAAG TGGTGATGTT GTTGGATTGT GGTACTATGC CCGCTAAAGA TGCCTTCTAC
TACTTGTGGA GAACATTCAG AGACCCAAAT GTGGCTGGTG CCTGTGGGGA AATGCGTGCT
TCCTTGGGAC CCAACAAGAA GTTATTGGCC AACCCATTGG TGGCAGCCCA GAATTTCGAA
TATAAGATCT CCAACATCTT GGATAAGCCG ATGGAATCTG TATTTGGCTT CATTTCTGTC
TTGCCCGGTG CGTTCTCAGC CTATAGATGG GAAGCATTGT TGAATGTGGA CGGCAAGGGA
CCTTTGGAGA AGTACTTCAA GGGTGAATAC TTGCATCTGG CCCAAAATGA CGATGAAGAA
GATGACGAAA GAGAGATAAA GGAACGTAAC TTTCAAGAAG CCGGTATCTT CACATCCAAT
ATGTACTTGG CCGAAGATAG AATTTTGTGT TTCGAGTTGG TTGCGAAAAA GAATCACAAC
TATATCTTGA GATACGTCAA TGAAGCCAAG GCTGAAACAG ATGTTCCTGA GAAAATCGAC
GAATTCGTCT TGCAGAGAAG AAGATGGTTG AACGGTTCCA TGTTTGCTGC TGCTTACGCC
GTTTTCCATT GGACGAAGAT CTGGAAATCA AACCATTCAT TACTCAGAAA GTTGTTCTTG
CAGCTTGAAT TCTACTACCA GTTGGTTACC ATCTTGGTGT CGTGGTTTTC TCTCGCATCT
TTCTTCTTGG TGTTCAGAAT TTTGACCGCC AACTTGGGTT CTACATCTAT GCACTTCAAT
ATTGGTAAGT ACTTGGCTGT AGTTTTCCTC TGGTTCTACG TGGGTTCAGT TGTTACTACT
TTCGTCCTTG CATTCGGTAA TACTCCTAGA GGTACTCGAA AATTCTATAT GGTGATAGCG
GTCTTTTTTG CGGTGCTCAT GGCCTACATG ATGTTTGCCG CTGTGTTCTT GGCCGTCCAC
ACTGTCAATT CTGTTCTTGA CGATCACAGA AAAGACTTCA AAGTCACAAT GCTCTTCACA
AACCAGAAGT TTAGAGATTT GATTGTATCT ACAGTTTCTA CCTACATCTT ATACTTTGCT
GGTGCTTTCA TCTACGGTGA GCCTAGTTTC ATGTTGACGT CGTTTGTCCA ATACGTGTTG
TTGTCGCCAA CCTACGTCAA TGTGTTGAAT ATTTACGCCT TCTGTAATAT CCATGATGTC
TCGTGGGGTA CCAAGGGTGT TCCCGTGGCA AAGGACTTGG GTTCTGCCAA ATCTGTTGGT
AACAAGAAGG ACGAATTGGT CATGATTGCT CCAGGGGTTA CGGAAGAGGT AAACGATACA
TATTTAGATA TCTTGGACAG CTTGAGAACA GACCCTCCCG TTCCAAAACC ACCCAAGAAG
AGGACTAAGG ACGACTCCTA CTACGCCTTC GTCAGAACGA TGACTGTGCT CGTGTGGATG
TTGTCCAACG CTATTCTTAT TGCTGTTGTG TTAGAAATCG GAGGTGTTGC TACATTCACC
GGTGACGACA CTATCAGTAA GGATGACTCC ATCAGCGGTA ACTCGGAAGT TTTCTTGACG
ATTATCTTGT GGATTGTCGC TGGTCTTGCC GCATTCAGAT TCATTGGATG TGTAATGTTC
CTTGTCCTTA AGTTATTCAG ACCATTGAAA TGGAGACTTA AGGCCAGAAA GGAAGTCAGT
AGAGCTATGC AACAACAATA G
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| Protein sequence | MTFSGDDYLI NPLEDADDDD DLDPFGDDDS LFSETGEEIV RRGTTIKRKD TLGRRNTTKS
KHSGAVAFED DYDFDDDDFK PKLNYTKTIK RARLVNGNYV IDAPVPQALL DTYGKKIDDS
GREMSFMRYT AVTCGPSNFM NFNYNVRQAL YSPPRETEIM ICITMYNEDE ILLGRTLKGV
FDNIKNLTNR SDPVWGDDSW KKIVVCIVND GRLELNKRTQ KLLTALGAFQ DGYAKSKIND
RTVNAHLYEY TSTVGIDVVN DRVHLCPNSN PVQFMFCLKE KNSRKINSHR WCFQSFAPII
NPKVVMLLDC GTMPAKDAFY YLWRTFRDPN VAGACGEMRA SLGPNKKLLA NPLVAAQNFE
YKISNILDKP MESVFGFISV LPGAFSAYRW EALLNVDGKG PLEKYFKGEY LHSAQNDDEE
DDEREIKERN FQEAGIFTSN MYLAEDRILC FELVAKKNHN YILRYVNEAK AETDVPEKID
EFVLQRRRWL NGSMFAAAYA VFHWTKIWKS NHSLLRKLFL QLEFYYQLVT ILVSWFSLAS
FFLVFRILTA NLGSTSMHFN IGKYLAVVFL WFYVGSVVTT FVLAFGNTPR GTRKFYMVIA
VFFAVLMAYM MFAAVFLAVH TVNSVLDDHR KDFKVTMLFT NQKFRDLIVS TVSTYILYFA
GAFIYGEPSF MLTSFVQYVL LSPTYVNVLN IYAFCNIHDV SWGTKGVPVA KDLGSAKSVG
NKKDELVMIA PGVTEEVNDT YLDILDSLRT DPPVPKPPKK RTKDDSYYAF VRTMTVLVWM
LSNAILIAVV LEIGGVATFT GDDTISKDDS ISGNSEVFLT IILWIVAGLA AFRFIGCVMF
LVLKLFRPLK WRLKARKEVS RAMQQQ
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