| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3564 |
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| Symbol | |
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| ID | 7388827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2957165 |
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| End bp | 2959090 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652395 |
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| Product | bifunctional enzyme including aminotransferase and chitin synthase protein |
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| Protein accession | YP_002550578 |
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| Protein GI | 222149621 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATATTGT TCTCTCCAGT TGCACGTGAC AGTGCAGCCG GACAGGCTGC CGCTTTGCGC
GCGCCTGTCT CGTTGCAGGA TGACACTCTC AAAATTTTTG GGTTTGATGA CCAATCCGTT
GGTCAGCCCT TGTCCGGGGG CACGGATATT CTCGCCTGCC TGACACTCTT CAACGAGCCT
GCCGAGGCGG TGGCGGGGAC ATTGGCCTTT CTTGCGGCCA ATCAGGACAT GCTGGCTAGC
CGAAACGGCC CTATACAACG GTTGGAAGTG GCCATCGTGC TGGATGGCCG CGACCGCGTT
CACCCAGAGA CCGAGGCACT GTTCAACCGG CTTGGCTTCG ATCTCGATTG GGGTTGCGAT
CCTGAGGCAG CGGGCATCGG CCAGCATGGG GCGGATGAGG CGCAAGTTCG CGTTCAGACC
CGCCTTATTC CGGTGGATCT GCTGACCGGG GTCAGCGGCA ATCCTCTTCG CGTGCATTTG
GCGGTGAAGG ACCGCAACAG GGGCAAGCTG GATAGCCATG CCTTCTTCTT TCGAAGCCTT
GCCGAACGCC TGCAGCCAGA TTTTGTCTTG CAGATTGATG CCGGGTCGAG ACCTGTTGCC
GATTGCCTAC CGGCATTGCT GGCGCAGATG GAACGCGAGC CTGACTGTGC AGCCCTTGCC
ACCAATATCG TCATGGAAGA CGCCGCCTTG ACCGATTGGC TGCAAAGCTG GCAACAGGCA
GATTTTCTCT GGCAGAAATT ATCCGATTGG CCGATTGGCA ACGGTTTGGG CTATCTTGAA
GTCGTGCCGG GGCAGGCCAG CCTGCTCAGA ATGTCGGCCT TGAGACGCGG GGCAAACGGC
GATCCTCTGG CCGCCTATCT TCGCGGGCTT TCCAGGCCGA AGAGCCTGAT GGAGGCCAAT
CTGTTTCTCG CGGAAGATCG AATCATCGGC GCGGAAATCG TCAAAAGCCA TCCTGCCTGC
ACCATCCGCT ATCATCACGA TGCCAATCTT GTCACCGATG GCTGCGCGAC GGTTGGCGAA
TTGCTGCGCC AGCGCCGCCG TTGGACAAAC AGTACGCTTG TGGCGCGCCT GGTGGCCATC
GGCAGCCTGG CCGATCTGCT ATGGCACGGT CGTCTGCCGC CTGCACGCTG GTGCTCGATG
GCATTGGCGC TGGCCTGGAC CCTGCTGCAA TTGCTGGAAC AATGGTTCAT CCCGGCGTCA
CTGGCCCTGC TTGTCTCCCT GACATCAGGG TTTTGGCAAG ACGAGGCCAA AAATGGTGTT
GCGGGCCAAG GTTTGGCATG GGGAATGGCG ACGGGTGTGT TGCTGTTCTG GCTTTATTGT
CTGGCCAGCA TGAAGGGGAG GGAGGGGGAA CGGTCTCTGA GCCGTAGGCT GCATGGCGGC
TTGCATGGCC TTGGCCTGGG CATCCTGCTG GCCTGCACGG TCCTGGGGTT TGCCATCTGC
CTTGTTGAGG TTGGTCCTGT CATTCAGGGG GCGATCCTGA CGGTTGCCCT TATCCTCGGC
ATGGCGGTCT GGCACCATTC GTCCCGCGGG ATGTCCGATC TGCTGAGAGT GTTCGTACTC
TATATCCCGT CCGCGCCCGT CGCCAGCTTC TATCTGCTGA GTTATGCGCT TGCCAATTTC
CACGATGTCA GTTGGGGCAC CAAGGGATTG GTCGGCGATA TCAAAGCCGT CATCCCGGCT
GGCTGGCGTC GGATGCGGTT GCGGCTTTTG ATCCTTTGGG TCGTCAGCAA TACCGCATTG
GTCTGGCTGG TGATGGGTGT CGTGCCGGGC GGCGCAATCA GCGTCCTGCA CTATGCCTGC
CTGCCGGTCG TTGGGCAGAT CGCCATCGCG TCCTTACTGC TGTTATCGGC AAGCTGCCGT
AAGCCCGTTT CACCGTCTCC AGAGGTCACA GTCCGAGCAG GTAGCGGGCC GCATCTTCAT
CGATGA
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| Protein sequence | MILFSPVARD SAAGQAAALR APVSLQDDTL KIFGFDDQSV GQPLSGGTDI LACLTLFNEP
AEAVAGTLAF LAANQDMLAS RNGPIQRLEV AIVLDGRDRV HPETEALFNR LGFDLDWGCD
PEAAGIGQHG ADEAQVRVQT RLIPVDLLTG VSGNPLRVHL AVKDRNRGKL DSHAFFFRSL
AERLQPDFVL QIDAGSRPVA DCLPALLAQM EREPDCAALA TNIVMEDAAL TDWLQSWQQA
DFLWQKLSDW PIGNGLGYLE VVPGQASLLR MSALRRGANG DPLAAYLRGL SRPKSLMEAN
LFLAEDRIIG AEIVKSHPAC TIRYHHDANL VTDGCATVGE LLRQRRRWTN STLVARLVAI
GSLADLLWHG RLPPARWCSM ALALAWTLLQ LLEQWFIPAS LALLVSLTSG FWQDEAKNGV
AGQGLAWGMA TGVLLFWLYC LASMKGREGE RSLSRRLHGG LHGLGLGILL ACTVLGFAIC
LVEVGPVIQG AILTVALILG MAVWHHSSRG MSDLLRVFVL YIPSAPVASF YLLSYALANF
HDVSWGTKGL VGDIKAVIPA GWRRMRLRLL ILWVVSNTAL VWLVMGVVPG GAISVLHYAC
LPVVGQIAIA SLLLLSASCR KPVSPSPEVT VRAGSGPHLH R
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