| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG02520 |
|---|
| Symbol | |
|---|
| ID | 3258890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006692 |
|---|
| Strand | + |
|---|
| Start bp | 713762 |
|---|
| End bp | 717559 |
|---|
| Gene Length | 3798 bp |
|---|
| Protein Length | 947 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638257873 |
|---|
| Product | chitin synthase 1, putative |
|---|
| Protein accession | XP_571995 |
|---|
| Protein GI | 58269678 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.616261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCACGATTGA TTCTCTTTCA AGCTTTCGCT TTGCTCGGGG GGATGGTGTG TACCAGTACG
TAATGGCAGA AGAGACGCGT CGCGTCCAAA AGACAAAGAG GACCGTGTGA TTTTCGGAAC
GGCGTTTGAT TTCTTGGCTA CTGGACGGAT CTCCTGGTGC CCACGGCGTC TCGTCGTTCA
CAGAGCTGGT CTCGGGCGTG TGATTCCTTC TTCCTCGCGT GCTACTTGCG CCTTCTCCTT
ACGTATTCCC ACTCCCCTCC TTCCTTCCCT CCTTCATCCT TTCGCCACTC AACTCACATC
CACACCCACC CACAAACACA CTCCTTCCAC CATGGCTTAC CACTACTCCC ACGACAGCAG
CCGTCGCCAG CCGCAGGGCG GCTACAATTA CCCTTCCAAC TATTCAAACC CCTCACAGTA
TTCCATACCC GACTCGGTCT ATTCCGGCCA CTCCACCAAC ACCCAACCCG TTCCTTCCCC
TGGCGGGTAC CACCCACAGC CTTCTTCTAC CACTCGGGTG GTTCAGCCAG CGTACTATCA
GCCACAGCCC ACCGCATCGT CCATGACTTC TCACGACGTT ATGTATGGCC GACCCAGCCC
TGGTCCTAAT CAGTACGGCG CCGCGCCAAG AGACGTCTTC CGAGGTCCTG GCGCCACGAC
AGTACCTCCT CCTCAACAGA CGCCGTACCA GCCCTACCCG GACCAACCAT ATCCTTCTCA
TACAGACTAT TCTGATGAAA ACAAATCTTT TAGTTCCACT ACTCACCTGG TTTCGCCGCA
GAAAGAATGG GGTGTCGGAA CTGTAGTACC GGTTACTACG ATACCACCTG TCAACCAACC
GCCTTACCAG CCGTATCAAG CATATCCGCC GCAGCCTTCC CCATCCCCGA CTACCCCCCG
AGGAGGTACC TCCCATTGGC ATGCTATGCG GAAGCAGTTG CTCGAGAGGC GAGTGATCAA
GCAGATCCCA TTGCACAATG GCAACTTGGT GATGGATGTG CCCGTGCCAA AGGGGGCCAT
CCCGAGCACC AAAGGACTAG GCGTGATGGA TGGAGAGATG GACAGCATGC GCTACTCGGC
GGCAACATGC GACCCTGATG ACTTTATGCG AAGCAAATTC AGCCTGAGGC AATATTTGTA
TGGCAGAAAG ACAGAGCTTT TTGTAAGTGT CCAGTCTGAA ATGTACGCTG ATTATCTAGA
TCGTCATGAC CATGTACAAT GAAAATTCCG AGCTCCTCCT GAGGACACTT AATGCCGTAA
TTAAGAATAT TGCCCATCTC ACGACACGCA CACGCTCAAA AACTTGGGGT CCCGATTCGT
GGAAAAAGGT GGTAGTCTGT ATCGTTGCTG ATGGCCGAAA GGTTGTCGAC CCAAGAGTTC
TCAAGGTGCT GCAATTGATG GGTGTCTATG CCGAGGTATG TGATCCAAAT TGGAATCCAG
CTAACAGGCC AGGGTGTCAT GAAAGACCAT GTCGTTGACA AGGAAACCCA AGCCCATATT
TTCGAGTACA CTTCGCAGGT CGTAGTGTCA GAAACCGGAG AGGTTGGCTT TGGTTCGACC
CCTGTTCAAA TCTTGTTCTG CCTCAAAGAG TAGGTCAACG GTATGCCAGA TCTGGACTGA
CCACCTAATA GGCAAAATAA GAAAAAACTC AATTCTCATC GTTGGTTTTT CAATGCCTTT
GGCCCACTTA TTAAACCCAA CGTTTGCGTG CTTCTGGACG TTGGCACAAA ACCCTCCGGT
CACTCCATAT ACGAGCTCTA CAAATGTTTT GAGAAGCATC CCACTGTTGG GGGAGCATGT
GGAGAGATTT TTGCAGACAC TGGAAAGTGG GGCAAATATT TATGGAACCC TTTGGTCGCA
GGCCAAAATT TTGAATACAA AATGAGCAAC ATACTCGACA AGCCATTCGA GAGTGTTTTT
GGACTAATCT CTGTCCTTCC AGGAGCATTT TCTGCCTATC GGTAAGCATT AGTGGACGCA
TTCAAAACTG ACGATCCAGG TATGACGCAG TGGCCAATCA CGCCGATGGG ACGGGTCCCC
TGGCAGCCTA TTTCCGAGGA GAGCTCATGA ACCAACCTGG TGCTACAGCA ACCATTTTTG
ACAGGAACAA GTTCCTGGCA GAAGATCGTA TTCTCGCGTT TGGTGCGTCA GCTTTGACTG
CAGTGACAAC TTCAAAAAGT TTACTGACAC CTTCCCCAGA AATCGTTGTC AAGAAGAATG
CTCGCTGGCG CTTGCAGTAT GTCAAGGCGG CCAAAGCTGG TACAGACGTT CCCGCTACCG
TCCCGGAGTT CATCTCTCAA CGAAGGAGAT GGCTGAACGG ATCCATCTTT GCTGCAACAT
ACGCAATGGT TTGTTTCTGG AGGATTTGGA CTAGTGGACA CGGTATTTTC AGAAAGTTTA
ATCTTACTAT TTTGACGGTA TATAGTGAGT AACGAAATCA TTAATTGAAG CTGACAGGTT
TAGATTTGGT TAATTTGCTC TTCAATTGGC TGTCTGTCTC CTCCTTTTAC CTTGCGTTCT
TCTTCCTCAT TAGCTCGTCC ATCTCTGGCA GCTCTGATCC TTTCAACGGG GCTGGGGATG
AGATATTCCA GGTGTTCAAC AAGGTCTATA TTGCTCTGAT GTAAGTGGCC TGAAGGTAGC
ATGATTATTC ATGAACTGAT AATGGGTAGT TTTGTCGTCT TGGTCTGTTC TCTGGGCAAT
CGTCCCCAAG GATCGAATTA TATGTACACT TTTTGGTGGG TACATACCTT CATTAGCTGA
GCTAACTTTG CTGTAGTATA TTCATGTTTG CTGTTTGCCA AGGTATCTTG CTGTACTGTG
CTGGATGGAC AGTCTACCAG GCGGTCCCAC ACACCTCGGA AGGTTGGGAA GATGTCTCTG
GGCTGTTTGA TAACAAGACG TTTGTACAAC TGGCCCTTGC TCTCATGGTA AGCTCGTATT
GGAACAGAAA ATATGCTGAC AGACGACAGG CAACGTACGG GTTGTATCTC ATTTCATCGC
TTCTCTACTT TGAGCCCTGG CACATGCTCA CATCATTCAT TCAATATCTC CTCCTTCTTC
CCTCATATGT CAATATCCTC CTCATTTACG CAATGTGCAA TTTGCATGAC GTTTCTTGGG
GAACCAAGGG TGATAATGGT TCCTCAAAAG ATCTTGGCAC CGCAAAAAAA GTAGAAAAGG
ACGGAAAGGA AATGGCCGAA GTGGCGTTAC CGACGAAGCA AGAGGATGTA GAGGCTCTAT
GGCAACAAGC CAGACAAGAG TTGAGAGTGC CGGTAAAAGA GAAGACTGAA AAGAGAAGTC
CAGAGACTAA AAGGGCCGAT GGTACGTCGA CTTTGCTTTG GATAGCTGTT GAACATCTGG
TCTGACCCAT CCGCAGAGGA TCGCAACTTT CGAACCAATG TCGTATTGTT GTTCCTTGGC
TCGAACATGC TTGTCATTTT ACTCTTCACC TCTTCCACCT TCACCAACTG GGTTAACTCG
CATTTTGTCG ATGCGACCAG CTCGACTTTC AATCCTTACC TTGTGAGTAT CATGCTGATT
CTCACCATAG TGGTCTGCTG AATGTCCAAA CAGACCGTGA TCTTTTACGC AGTTCTCGGC
CTCTCAGCCC TTCGATTCGC AGGTTGCCTG TTGTATCTCA TTTTCAGGAT GTTCGGCTAT
TGAGTATCCC GAACAATACG TATTCCGAGA ACTTTCCTTC CAGTTTGTAG TATGATCTAC
ACCTAACTCC TATACATAGC GACTGCAGCG ATCTCCTCAG CTGGTCTGAT GGAACGATAT
GTGCAACGAA GACCATTG
|
|---|
| Protein sequence | MAYHYSHDSS RRQPQGGYNY PSNYSNPSQY SIPDSVYSGH STNTQPVPSP GGYHPQPSST
TRVVQPAYYQ PQPTASSMTS HDVMYGRPSP GPNQYGAAPR DVFRGPGATT VPPPQQTPYQ
PYPDQPYPSH TDYSDENKSF SSTTHLVSPQ KEWGVGTVVP VTTIPPVNQP PYQPYQAYPP
QPSPSPTTPR GGTSHWHAMR KQLLERRVIK QIPLHNGNLV MDVPVPKGAI PSTKGLGVMD
GEMDSMRYSA ATCDPDDFMR SKFSLRQYLY GRKTELFIVM TMYNENSELL LRTLNAVIKN
IAHLTTRTRS KTWGPDSWKK VVVCIVADGR KVVDPRVLKV LQLMGVYAEG VMKDHVVDKE
TQAHIFEYTS QVVVSETGEV GFGSTPVQIL FCLKEQNKKK LNSHRWFFNA FGPLIKPNVC
VLLDVGTKPS GHSIYELYKC FEKHPTVGGA CGEIFADTGK WGKYLWNPLV AGQNFEYKMS
NILDKPFESV FGLISVLPGA FSAYRYDAVA NHADGTGPLA AYFRGELMNQ PGATATIFDR
NKFLAEDRIL AFEIVVKKNA RWRLQYVKAA KAGTDVPATV PEFISQRRRW LNGSIFAATY
AMVCFWRIWT SGHGIFRKFN LTILTVYNLV NLLFNWLSVS SFYLAFFFLI SSSISGSSDP
FNGAGDEIFQ VFNKVYIALI FVVLVCSLGN RPQGSNYMYT FCIFMFAVCQ GILLYCAGWT
VYQAVPHTSE GWEDVSGLFD NKTFVQLALA LMATYGLYLI SSLLYFEPWH MLTSFIQYLL
LLPSYVNILL IYAMCNLHDV SWGTKGDNGS SKDLGTAKKV EKDGKEMAEV ALPTKQEDVE
ALWQQARQEL RVPVKEKTEK RSPETKRADE DRNFRTNVVL LFLGSNMLVI LLFTSSTFTN
WVNSHFVDAT SSTFNPYLTV IFYAVLGLSA LRFAGCLLYL IFRMFGY
|
|---|
| |