| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51281 |
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| Symbol | CHS2.2 |
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| ID | 4851469 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1896022 |
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| End bp | 1899054 |
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| Gene Length | 3033 bp |
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| Protein Length | 1001 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393177 |
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| Product | chitin synthase 2.2 |
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| Protein accession | XP_001387995 |
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| Protein GI | 126274597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACT ACAACCCTTA TCGTCCCACA GAGTACTCCG ACAATGATAG GGACGACCAG
AATTTGTTGA ATCCCAATGG AGACAATTTT CGAAACCCAT TTGGAAGCAA CAACTCTAGC
ACTTCTGCTC TCCGCGACCA CAGTGGAACC CACGGTTCTG GTTCTAATTC TAGTACTAAC
ATTCTTCAAG AACCACCCCG TACTCATAGT CGTAGTAACT CAGGAGCCTA TGGCAGATCT
TCCTCATACG ACCAGAGAAC TCCTCCGCTG GAGCAACCAA TATTCAACAC CTCTCATCTT
CAACCACCAG GCTTTTCACC CATCCCAAGC AATACTGATT TTGAAGAAGA AAGATACGAG
ATGAATCCAT ACCCACCACA GAACAAACCA AATCGAAGTG GATTGACGAT TTTTCGTCCT
GGATTCCTTC CAAAGAGAGG AAATGAAGAA ACTCCATACG ACCAGAACAT CCGATTCGAG
TTCAAAGGAG ATTCGTACAA CCTTTCGACC TTCCAGGTGC GTGAATCTCC TGAGCCCCAA
CCACTTCAAT CTTCTCCTTA TGTACCTTCA TTTGTGGTAG AAGGACAGGA TGAAGAAACA
CTTCGATATC AGAGGGGGGC CTCCCCAAGT GCACCAAAGG CATCCAAAGG GCAATTTAGT
GAAAATGAAA GAGTCAAAAA GCCTCAGCCA AAAGCCGGTT TCACCACTGG TATCAATGGT
AAGTTGGTCT TGGATTGTCC GGTTGCAACC AATTTGTTAA GCACCTATCC CGATTATAAA
GCTGGAGCAG AACGTGGAGG ACTTTCGAAC GAGTTTTACT TCATGAGATA TACTGCAGTG
ACATGTGGGC CATCCAATTT CTATCGTGAA GGTTACTTGT TAAGAACAAT ACACTATGCT
ATTCCCAGGA AAACGGAAAT CATGGTGGTG ATTACCATGT ACAACGAGAA CGATGTCCTT
TTAGGAAGGA CTTTGAAGGG AGTATTGGAC AATATTAAAT ACATGGAATC CAAGAAGAGA
TCCTCGATGT GGGGAGAGGG TTCCTGGAAG AAGATTATTG TTTGTATTAT CAGTGATGGT
AGAACGAAGA TCAACGACAG GGCCCAAGCT TTACTTGCTG GCTTGGGGGT ATACCAAGAA
GGGTTGGCAT CTGGGGCTGT CAATGACAAA CCCGTGCAAG CCCACATGTA TGAATACACT
TCAAGAATAG GGATCAAGAG AGTAACTGAT ACTGTTGAAT TGACCCTGAA AAAAGTTGTT
CCTACCCAGT TCTTGTTCTG CTTGAAGGAG AAGAACGCTA AGAAAATTAA TTCTCACAGG
TGGTGTTTTC AAGCAATTGG TCAAGTTCTT GATCCCAAAG TCGTAGTATT GTTAGACGCT
GGTACTCAGC CTACGGAGAA ATCCCTTTAC CGTATCTGGA AGGAGTTTGA TATGGACCCA
AGGGTTGCTG GATGTTGTGG AGAGATCAAG GCATTATTGC GGACGAGACA GATGTTCACT
AATCCTATGG TTTATGCTCA GAACTTCGAA TATAAAATGT CAAACATCTT GGACAAGCCG
ATGGAATCTG CTTTTGGTTT TATTTCGGTG CTTCCAGGTG CCTTTTCCGC TTATCGTTAC
ATTGCTCTTC AAAATGATAT CAATGGTAAT GGACCTCTCG AAAAATACTT CAAGGGCGAA
TTCTTACATG CCAGCGAAGA GCTCGATAAG AACGACGATG AGTACCAGCT TAAGAAAGAA
TTGAGACTGA AAGAAGCCAA TGTTTTCACC TCAAACATGT ATTTGGCCGA AGACAGAATC
TTGTGTTACG AATTAGTGGC CAAAAAAGAT TGTGGATGGC TCTTGAGATA TTGTAAAGGT
GCTAGTGCCG CTACAGATGT ACCCGAATCG CTTGCAGAAT TTATCTTGCA AAGAAGAAGA
TGGTTGAATG GGTCTTTTTT CGCAGCCATT TATTCTCTTG TTCATTTTCC CAAAGTTTGG
GGTTCATCTC ATTCAATTTC TAGAAAGATA ATGCTCCATA TTGAATTTTT GTATCAATTT
GTTAATCTCG TGTTATCATG GTTTGCTATT GGGTCATACT TCTTGGTATT CAGAATCTTG
TCCACCTCCT TGGCCAATCC TGACTTGGGT TTCAAGCCAG GAAAAGTATT TTCGTTCATT
TTCCTCTGGC TCTACCTAGC ATCATTGGTT ACTACTTTTG TTCTTAGTTT TGGTAATAAG
CCCAAAGGGA CGGAGAAGTT CTATATTGTA ATTGTCTACT TCTTTGCAAT CTTAATGGGG
TACATGATAT TCGCAGCCAT ATATTTGGCT GCACACTCTA TTCATCAGAT AACGAAAGAT
GGTACCAAGA TCACTATAGC TCTTTTCTTC AAGAATGCCC AATTTAGAGA CTTGGTCATT
GCAACATCAT CGACCTATTT GCTCTATTTC GTAGCCTCGT TCATATATTT TCAACCGGCT
CACATGTTCA CTTCATTTAT CCAGTATCTT TTGCTTTCCC CCTCGTACAT CAATATTCTC
AACATCTACG CTTTCTGCAA TATCGATGAT ATCTCATGGG GAACTAAGGG AGATACTGGA
GGAGTAAAGT TGGCCCTGGC TGAGAAAGGC GAAGACGGTG TTTTCCGGTT CCAATTCAAT
GTTTCTGTGG AACCTCTGGA AATCAACGAC TCATACAATA AGCAGGTGGC CAAGATCAAC
CAGCCAGAAG ACAAACCCGA TAGCGGTGAT ACCAAAAAGA CCTCCTCCGA GGATTACTAC
GCATTTGTTA GGTCGATGAC AGTTCTTGTC TGGATGTTTA CTAATTCCAT CATTGTGACA
GCAGTGTTGA ATACTGGAGG CTTTGACTAC TTTGGAAAAG ACAGTTCTTC TAGAGTCGAT
ACAGAGAACA GATCAACAAT ATTCTTGACG GTAATCTTGT GGATGGTGGC TATCATGGCA
CTCTTCCGAT TCACTGGTTG CATTGCATAT TTGGTTACAA GAATCAAGAG TAAGGTCAAA
TCACCAAAGA AAGTACCATT GACAAAGAAA TAG
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| Protein sequence | MSYYNPYRPT EYSDNDRDDQ NLLNPNGDNF RNPFGSNNSS TSALRDHSGT HGSGSNSSTN
ILQEPPPYGR SSSYDQRTPP LEQPIFNTSH LQPPGFSPIP SNTDFEEERY EMNPYPPQNK
PNRSGLTIFR PGFLPKRGNE ETPYDQNIRF EFKGDSYNLS TFQVRESPEP QPLQSSPYVP
SFVVEGQDEE TLRYQRGASP SAPKASKGQF SENERVKKPQ PKAGFTTGIN GKLVLDCPVA
TNLLSTYPDY KAGAERGGLS NEFYFMRYTA VTCGPSNFYR EGYLLRTIHY AIPRKTEIMV
VITMYNENDV LLGRTLKGVL DNIKYMESKK RSSMWGEGSW KKIIVCIISD GRTKINDRAQ
ALLAGLGVYQ EGLASGAVND KPVQAHMYEY TSRIGIKRVT DTVELTLKKV VPTQFLFCLK
EKNAKKINSH RWCFQAIGQV LDPKVVVLLD AGTQPTEKSL YRIWKEFDMD PRVAGCCGEI
KALLRTRQMF TNPMVYAQNF EYKMSNILDK PMESAFGFIS VLPGAFSAYR YIALQNDING
NGPLEKYFKG EFLHASEELD KNDDEYQLKK ELRLKEANVF TSNMYLAEDR ILCYELVAKK
DCGWLLRYCK GASAATDVPE SLAEFILQRR RWLNGSFFAA IYSLVHFPKV WGSSHSISRK
IMLHIEFLYQ FVNLVLSWFA IGSYFLVFRI LSTSLANPDL GFKPGKVFSF IFLWLYLASL
VTTFVLSFGN KPKGTEKFYI VIVYFFAILM GYMIFAAIYL AAHSIHQITK DGTKITIALF
FKNAQFRDLV IATSSTYLLY FVASFIYFQP AHMFTSFIQY LLLSPSYINI LNIYAFCNID
DISWGTKGDT GGVKLALAEK GEDGVFRFQF NVSVEPLEIN DSYNKQVAKI NQPEDKPDSG
DTKKTSSEDY YAFVRSMTVL VWMFTNSIIV TAVLNTGGFD YFGKDSSSRV DTENRSTIFL
TVILWMVAIM ALFRFTGCIA YLVTRIKSKV KSPKKVPLTK K
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