19 homologs were found in PanDaTox collection
for query gene Apre_0961 on replicon NC_013171
Organism: Anaerococcus prevotii DSM 20548



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013171  Apre_0961  DNA-directed RNA polymerase, omega subunit  100 
 
 		 62 aa  125  1.0000000000000001e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.0127007  n/a   
 
 
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NC_008261  CPF_2000  DNA-directed RNA polymerase subunit omega  39.34 
 
 		 70 aa  48.9  0.00002  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
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NC_008262  CPR_1718  DNA-directed RNA polymerase subunit omega  39.34 
 
 		 70 aa  48.9  0.00002  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0034  DNA-directed RNA polymerase, omega subunit  44.68 
 
 		 107 aa  47.4  0.00007  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
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NC_013216  Dtox_2317  DNA-directed RNA polymerase, omega subunit  39.66 
 
 		 68 aa  47  0.00008  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000192239  hitchhiker  0.00377511 
 
 
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NC_009012  Cthe_1314  DNA-directed RNA polymerase, omega subunit  42.37 
 
 		 78 aa  46.6  0.0001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.519815  n/a   
 
 
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NC_010001  Cphy_2879  DNA-directed RNA polymerase, omega subunit  40 
 
 		 82 aa  47  0.0001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000467592  n/a   
 
 
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NC_009513  Lreu_1175  DNA-directed RNA polymerase, omega subunit  40.35 
 
 		 72 aa  45.8  0.0002  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000000000347215  n/a   
 
 
-
 
NC_009253  Dred_1701  DNA-directed RNA polymerase, omega subunit  37.7 
 
 		 75 aa  45.1  0.0003  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
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NC_010718  Nther_1330  DNA-directed RNA polymerase, omega subunit  42.37 
 
 		 63 aa  45.4  0.0003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  decreased coverage  0.00000123249  normal  0.453103 
 
 
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NC_010577  XfasM23_0755  DNA-directed RNA polymerase subunit omega  41.51 
 
 		 111 aa  43.9  0.0007  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_1760  DNA-directed RNA polymerase subunit omega  39.29 
 
 		 70 aa  43.1  0.001  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0842  DNA-directed RNA polymerase subunit omega  42.31 
 
 		 98 aa  42.4  0.002  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1790  DNA-directed RNA polymerase, omega subunit  37.29 
 
 		 68 aa  42.4  0.002  Clostridium cellulolyticum H10  Bacteria  normal  0.370584  n/a   
 
 
-
 
NC_008532  STER_1397  DNA-directed RNA polymerase subunit omega  39.66 
 
 		 104 aa  42.7  0.002  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3844  DNA-directed RNA polymerase subunit omega  39.13 
 
 		 68 aa  42.4  0.002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_0472  RNA polymerase, omega subunit  37.5 
 
 		 67 aa  41.2  0.005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
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NC_013889  TK90_2002  DNA-directed RNA polymerase, omega subunit  40 
 
 		 91 aa  40.4  0.008  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_2143  DNA-directed RNA polymerase, omega subunit  33.33 
 
 		 74 aa  40  0.01  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
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