Gene Ccel_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1790 
Symbol 
ID7310522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2146289 
End bp2146495 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content37% 
IMG OID643608722 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_002506120 
Protein GI220929211 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.370584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATC CTTCAATCAA TGAATTGATG AAAAAAGTAG ACAGCAGGTA CACATTAGCA 
GTGGAGGCTG CAAAAAGGGC AAGACAATTA GTTGACGGCG CAACCAAAAT GGCAAAGTGT
GATTCCGATA AGGAAGTTAC GATTGCTATA AATGAGATAG CAGAGGATAA AATAACATAT
GTTAGAACAA AGAGCGGGAT AAAATAG
 
Protein sequence
MIYPSINELM KKVDSRYTLA VEAAKRARQL VDGATKMAKC DSDKEVTIAI NEIAEDKITY 
VRTKSGIK