Gene Apre_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0961 
Symbol 
ID8397747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1028769 
End bp1028957 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content34% 
IMG OID644995308 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_003152710 
Protein GI257066454 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0127007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC CATCATTTAA AAAATTAAGC GAAATTAGTC CAAGCAGATA TGAAATTTGC 
ATGATGTGTG CCAAAAGAGC AAGAAGGATT GTTAATGGTT CGGCTCCTTT GACAGAAAAA
GTAGAGGCTA AGCCAGTAAC TCAAGCATTA AATGAAGTTA TAGAAGGGAA AGTTAGCAAA
AAATGCTAG
 
Protein sequence
MNNPSFKKLS EISPSRYEIC MMCAKRARRI VNGSAPLTEK VEAKPVTQAL NEVIEGKVSK 
KC