17 homologs were found in PanDaTox collection
for query gene A2cp1_4002 on replicon NC_011891
Organism: Anaeromyxobacter dehalogenans 2CP-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011891  A2cp1_4002  hypothetical protein  100 
 
 		 767 aa  1580    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0850  type III restriction protein res subunit  26.05 
 
 		 877 aa  86.7  0.000000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013207  Aaci_3087  type III restriction protein res subunit  24.15 
 
 		 835 aa  63.2  0.00000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0973  type III restriction enzyme, res subunit family  24.25 
 
 		 892 aa  60.8  0.00000008  Bacillus cereus B4264  Bacteria  normal  0.0241934  n/a   
 
 
-
 
NC_007404  Tbd_2275  hypothetical protein  24.22 
 
 		 902 aa  58.2  0.0000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_4095  type III restriction enzyme, res subunit  24.14 
 
 		 899 aa  53.9  0.00001  Acidovorax sp. JS42  Bacteria  normal  0.18343  normal  0.460419 
 
 
-
 
NC_009253  Dred_0868  type III restriction enzyme, res subunit  21.84 
 
 		 864 aa  53.5  0.00002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0304  type III restriction protein res subunit  25.52 
 
 		 890 aa  51.6  0.00005  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2739  hypothetical protein  41.67 
 
 		 881 aa  51.6  0.00006  Geobacter uraniireducens Rf4  Bacteria  normal  0.0746674  n/a   
 
 
-
 
NC_008321  Shewmr4_2778  type III restriction enzyme, res subunit  25.9 
 
 		 885 aa  51.2  0.00006  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.223386 
 
 
-
 
NC_009483  Gura_4389  type III restriction enzyme, res subunit  34.34 
 
 		 858 aa  51.2  0.00007  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_1462  superfamily II DNA/RNA helicase  22.48 
 
 		 736 aa  50.4  0.0001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0675  Type III restriction enzyme, res subunit  26.75 
 
 		 898 aa  48.1  0.0006  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.564365 
 
 
-
 
NC_011666  Msil_1948  type III restriction protein res subunit  35.37 
 
 		 982 aa  47  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009253  Dred_0515  type III restriction enzyme, res subunit  34.09 
 
 		 877 aa  46.6  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008738  Maqu_4239  type III restriction enzyme, res subunit  24.15 
 
 		 907 aa  45.1  0.005  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_011879  Achl_4044  type III restriction protein res subunit  32.61 
 
 		 867 aa  43.9  0.01  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.856779 
 
 
-
 
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