18 homologs were found in PanDaTox collection
for query gene Vapar_5848 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5848  transcriptional regulator, XRE family  100 
 
 		 176 aa  352  2e-96  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_5240  XRE family transcriptional regulator  42.94 
 
 		 159 aa  131  6e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5619  XRE family transcriptional regulator  42.94 
 
 		 159 aa  131  6e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  0.173792  normal  0.0387834 
 
 
-
 
NC_007511  Bcep18194_B0072  XRE family transcriptional regulator  43.67 
 
 		 159 aa  114  5e-25  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_3385  XRE family transcriptional regulator  35.54 
 
 		 169 aa  102  3e-21  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_0718  XRE family transcriptional regulator  37.28 
 
 		 171 aa  101  5e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.764173  normal  1 
 
 
-
 
NC_007949  Bpro_5088  XRE family transcriptional regulator  35.54 
 
 		 167 aa  94.4  8e-19  Polaromonas sp. JS666  Bacteria  hitchhiker  0.0000165067  normal  1 
 
 
-
 
NC_007949  Bpro_5036  XRE family transcriptional regulator  32.52 
 
 		 166 aa  80.5  0.00000000000001  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011060  Ppha_2047  transcriptional regulator, XRE family  43.86 
 
 		 83 aa  48.5  0.00004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007514  Cag_1274  XRE family transcriptional regulator  42.11 
 
 		 86 aa  46.6  0.0002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.329441  n/a   
 
 
-
 
NC_008607  Ppro_3808  XRE family transcriptional regulator  38.98 
 
 		 80 aa  47  0.0002  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0020912  n/a   
 
 
-
 
NC_010717  PXO_03585  transcriptional regulator  54.05 
 
 		 206 aa  44.3  0.001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2664  transcriptional regulator, XRE family  50 
 
 		 83 aa  43.1  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.406995 
 
 
-
 
NC_008261  CPF_0928  Cro/CI family transcriptional regulator  27.59 
 
 		 167 aa  42.7  0.003  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.00442924  n/a   
 
 
-
 
NC_012918  GM21_0820  transcriptional regulator, XRE family  33.9 
 
 		 79 aa  42.7  0.003  Geobacter sp. M21  Bacteria  n/a    normal  0.0102782 
 
 
-
 
NC_009253  Dred_0875  XRE family transcriptional regulator  41.46 
 
 		 77 aa  41.2  0.008  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000023095  n/a   
 
 
-
 
NC_007643  Rru_A0278  XRE family transcriptional regulator  31.37 
 
 		 145 aa  40.8  0.01  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_1225  transcriptional regulator, XRE family  38.89 
 
 		 88 aa  40.8  0.01  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
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