14 homologs were found in PanDaTox collection
for query gene TK90_1936 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_1936  cytochrome c class I  100 
 
 
188 aa  386  1e-107  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0891775  normal 
 
 
-
 
NC_011901  Tgr7_2508  cytochrome c class I  62.22 
 
 
150 aa  135  2e-31  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3973  cytochrome c class I  42.65 
 
 
132 aa  115  5e-25  Thauera sp. MZ1T  Bacteria  normal  0.558222  n/a   
 
 
-
 
NC_008044  TM1040_1744  cytochrome c, class I  52.63 
 
 
143 aa  107  2e-22  Ruegeria sp. TM1040  Bacteria  normal  0.289502  normal 
 
 
-
 
NC_009955  Dshi_3782  cytochrome c class I  46.09 
 
 
152 aa  103  2e-21  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.637528  normal  0.789636 
 
 
-
 
NC_009957  Dshi_4058  cytochrome c class I  46.09 
 
 
152 aa  103  2e-21  Dinoroseobacter shibae DFL 12  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1387  cytochrome c, class I  42.53 
 
 
133 aa  93.6  1e-18  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009475  BBta_p0105  putative cytochrome c, class I precursor  46.24 
 
 
144 aa  79.3  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.366787 
 
 
-
 
NC_009379  Pnuc_0456  cytochrome c oxidase, cbb3-type, subunit III  34.07 
 
 
312 aa  46.6  0.0002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.844005  n/a   
 
 
-
 
NC_009921  Franean1_1810  cytochrome c class I  29.03 
 
 
294 aa  42.4  0.004  Frankia sp. EAN1pec  Bacteria  normal  0.780394  normal  0.101949 
 
 
-
 
NC_013595  Sros_2676  hypothetical protein  59.26 
 
 
269 aa  42.4  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.543217 
 
 
-
 
NC_010531  Pnec_1360  cytochrome c oxidase, cbb3-type, subunit III  31.25 
 
 
308 aa  42  0.005  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.240618 
 
 
-
 
NC_013422  Hneap_1968  cytochrome c class I  32.67 
 
 
238 aa  42  0.005  Halothiobacillus neapolitanus c2  Bacteria  unclonable  0.00000548419  n/a   
 
 
-
 
NC_012792  Vapar_6249  cytochrome c550  39.74 
 
 
164 aa  41.6  0.006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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