Gene TM1040_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1744 
Symbol 
ID4075808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1838579 
End bp1839010 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID638007058 
Productcytochrome c, class I 
Protein accessionYP_613739 
Protein GI99081585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.289502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA AATACCTGAT CCTAGGTGCC AGCGTCGCAC TGGCTGCTGC TGCTTTTGTT 
TTTCTTCGAC CGGAGGCGTC AGGGACGGCG GCGCGGTCCC CCTCAGGTGA CACGGCCAGC
CTTGCGGCGA TCACGATACC GGATCTTGCG GGCAATCAGA TCGTCGGTCG CAATATCTTT
GAGACAAGCT GTGCGGCCTG CCATGGTGCT CAGGGCGGCG GCAACCCCGA AGCGGGGCCG
CCGCTTATTC ACAAAATCTA TGAACCGAGC CATCATGGCG ACGAAAGCTT TCAACGCGCC
GTCGCAAACG GGGTGCGCGC GCATCACTGG CACTTTGGTG ACATGCCCCC GGTCGAGGGT
CTCACACGGG GCAATGTGGC CATGGTGATC GACTATATTC GCGCGGTTCA GCGCGCCAAC
GGGATAAACT GA
 
Protein sequence
MNQKYLILGA SVALAAAAFV FLRPEASGTA ARSPSGDTAS LAAITIPDLA GNQIVGRNIF 
ETSCAACHGA QGGGNPEAGP PLIHKIYEPS HHGDESFQRA VANGVRAHHW HFGDMPPVEG
LTRGNVAMVI DYIRAVQRAN GIN