Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1744 |
Symbol | |
ID | 4075808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1838579 |
End bp | 1839010 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007058 |
Product | cytochrome c, class I |
Protein accession | YP_613739 |
Protein GI | 99081585 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.289502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAGA AATACCTGAT CCTAGGTGCC AGCGTCGCAC TGGCTGCTGC TGCTTTTGTT TTTCTTCGAC CGGAGGCGTC AGGGACGGCG GCGCGGTCCC CCTCAGGTGA CACGGCCAGC CTTGCGGCGA TCACGATACC GGATCTTGCG GGCAATCAGA TCGTCGGTCG CAATATCTTT GAGACAAGCT GTGCGGCCTG CCATGGTGCT CAGGGCGGCG GCAACCCCGA AGCGGGGCCG CCGCTTATTC ACAAAATCTA TGAACCGAGC CATCATGGCG ACGAAAGCTT TCAACGCGCC GTCGCAAACG GGGTGCGCGC GCATCACTGG CACTTTGGTG ACATGCCCCC GGTCGAGGGT CTCACACGGG GCAATGTGGC CATGGTGATC GACTATATTC GCGCGGTTCA GCGCGCCAAC GGGATAAACT GA
|
Protein sequence | MNQKYLILGA SVALAAAAFV FLRPEASGTA ARSPSGDTAS LAAITIPDLA GNQIVGRNIF ETSCAACHGA QGGGNPEAGP PLIHKIYEPS HHGDESFQRA VANGVRAHHW HFGDMPPVEG LTRGNVAMVI DYIRAVQRAN GIN
|
| |