17 homologs were found in PanDaTox collection
for query gene Strop_1946 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_1946  hypothetical protein  100 
 
 
70 aa  140  6e-33  Salinispora tropica CNB-440  Bacteria  normal  0.185313  normal  0.213914 
 
 
-
 
NC_009380  Strop_1995  HAD family hydrolase  65.22 
 
 
215 aa  97.1  7e-20  Salinispora tropica CNB-440  Bacteria  normal  normal  0.273033 
 
 
-
 
NC_007333  Tfu_0577  HAD family hydrolase  54.69 
 
 
216 aa  64.7  0.0000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3651  HAD-superfamily hydrolase, subfamily IA, variant 1  49.15 
 
 
219 aa  52.8  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.336583  n/a   
 
 
-
 
NC_013510  Tcur_0310  HAD-superfamily hydrolase, subfamily IA, variant 1  45 
 
 
222 aa  51.6  0.000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6883  phosphoglycolate phosphatase  48.33 
 
 
219 aa  51.2  0.000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6763  HAD family hydrolase  50 
 
 
216 aa  50.4  0.000007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1637  hydrolase, HAD-superfamily, subfamily IIIA  43.55 
 
 
222 aa  50.1  0.00001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0204902  normal 
 
 
-
 
NC_014165  Tbis_2329  HAD-superfamily hydrolase  57.89 
 
 
217 aa  49.3  0.00002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.480139 
 
 
-
 
NC_013510  Tcur_3972  HAD-superfamily hydrolase, subfamily IA, variant 1  42.86 
 
 
220 aa  48.5  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2155  Haloacid dehalogenase domain protein hydrolase  39.66 
 
 
235 aa  48.1  0.00004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4488  HAD family hydrolase  40 
 
 
219 aa  47.4  0.00007  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1142  HAD family hydrolase  42.86 
 
 
218 aa  46.6  0.0001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2725  HAD-superfamily hydrolase  56.1 
 
 
224 aa  44.7  0.0004  Thermobispora bispora DSM 43833  Bacteria  normal  0.305002  normal 
 
 
-
 
NC_013530  Xcel_3204  HAD-superfamily hydrolase, subfamily IA, variant 1  44.26 
 
 
215 aa  43.5  0.001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.78222  n/a   
 
 
-
 
NC_013235  Namu_1941  HAD-superfamily hydrolase, subfamily IA, variant 1  53.85 
 
 
230 aa  41.6  0.003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139802  normal  0.193956 
 
 
-
 
NC_014210  Ndas_0396  Haloacid dehalogenase domain protein hydrolase  54.55 
 
 
223 aa  40.8  0.007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.241335  normal 
 
 
-
 
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