| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3651 |
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| Symbol | |
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| ID | 8327841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4265024 |
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| End bp | 4265683 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944142 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003101382 |
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| Protein GI | 256377722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.336583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAAGA TCGAGGCGGT CTTCTTCGAC GTCGGCGAGA TCCTGGTCGA CGAGACCCGC
GAGTACGGCA CCTGGGCTGA CTGGCTCGGC GTGCCCCGCC ACACCTTCTC CGCGGTCTTC
GGCGCCGTCA TCGCCCAGGG CAAGGACTAC CGCGAGACCT TCCAGGTGTT CCAGCCGGGG
TTCGACCTGG CGAAGGAGCG GGAGCGGCGT GTCGAGGCCG GGCAGGCGGA GAGCTTCACC
GAGGAGAACC TGTACCCGGA CGCCCGCCCC TGCTTCGAGC GGCTGCGTGC TGACGGCCTG
CTGGTCGGGC TGGCGGGCAA CCAGACCGCC AGGGCCGAGG GCATCCTGCG CGGGCTTGAC
CTGCCGGTCG ACCTGATCGG CACCTCGGAC ACCTGGGGCG TGGAGAAGCC CGGCGTCGCG
TTCTTCGAGC GCGTCGTCGC CGAGGCCGGA GTGGCCGCCG AGTCCGTCCT CTACGTCGGT
GACCGGCTCG ACAACGACAT CCGTCCCGCC CAGCAGGCCG GACTGGCCAC CGCGCTGATC
CGCAGGGGGC CGTGGGGGCT GATCCTGCGC GATCCGGACG TCGAGGCCAG GTGCGCGTTC
GTGCTCGACG ACCTGACCGA GCTGGCCGAC CACGTGGCCC GGCACAACGG CGCAGCCTGA
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| Protein sequence | MAKIEAVFFD VGEILVDETR EYGTWADWLG VPRHTFSAVF GAVIAQGKDY RETFQVFQPG
FDLAKERERR VEAGQAESFT EENLYPDARP CFERLRADGL LVGLAGNQTA RAEGILRGLD
LPVDLIGTSD TWGVEKPGVA FFERVVAEAG VAAESVLYVG DRLDNDIRPA QQAGLATALI
RRGPWGLILR DPDVEARCAF VLDDLTELAD HVARHNGAA
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