Gene Strop_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1946 
Symbol 
ID5058409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2217144 
End bp2217356 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content70% 
IMG OID640474219 
Producthypothetical protein 
Protein accessionYP_001158785 
Protein GI145594488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.185313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.213914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG TCAGCCGCGA GGAAATCCTC TACGTCGGCG ACCACCCCGA CCACGACATC 
ACCGCCGGCC GCGCCGCCAG ACTACGCACC GCCCTCGTAC GCCGTGGCCC CTGGGGCCAC
CTGTGGAGCC ACGACCCCGC CGTACGGGCG AGCGCCCACC TGGTCGCATC GTCTCTGGAC
GAGATCCGGC AAGTACTGAC CGGCACTCGA TAG
 
Protein sequence
MTPVSREEIL YVGDHPDHDI TAGRAARLRT ALVRRGPWGH LWSHDPAVRA SAHLVASSLD 
EIRQVLTGTR