| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1142 |
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| Symbol | |
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| ID | 5057592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1286331 |
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| End bp | 1286987 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640473412 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001157991 |
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| Protein GI | 145593694 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACGA GCGTATTCTT CGACGTGGGC GAGACCATCG TTGACGAGTC CCGGGAGTAC
GGCACCTGGG CGGACTGGCT CGGGGTACCG CGCCACACCT TCTCGGCCGT CTTCGGGGCG
ATCATCGCTC GCGGCCTGGA CTACCGGGAG ACGTTCCAGG TCTTCCGACC GGGCTTCGAC
CTGACCGAGG AACGGGAACG CCGGACGGCG GCGGGCCAGC CGGAGTCCTT CACCGAGGAA
GACCTCTACC CGGATGCGCG GCCGTGCCTG GCCGCGCTGC GCGAGTCGGG GCTACAGGTC
GGCCTCGCCG GCAACCAGAC AGCACGGGCG GAGACAATCC TGCGCGCCCT GGACCTACCG
GTCGACGTGA TCGGCACCTC GGACGGCTGG GGTGTGGAGA AGCCTTCCAC CGCATTCTTC
GACCGCGTCA TCACCGAGGC AGGATGCCCC GCCGACCAGG TGCTCTACGT CGGGGACCGG
TTGGACAACG ACATCCGGCC AGCGCAGGAG GCGGGAATCG CCACCGCACT GGTCCGTCGC
GGCCCGTGGG GCTACATCCT CGGCGACAAG ACGGTCAGCG ACCGATGCAT GTTCCAGCTC
GACTCGCTGG CCGAGCTGCC TGACCTCGTA CGCAAGCACA ACCAGTCGGC ACGCTAA
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| Protein sequence | MITSVFFDVG ETIVDESREY GTWADWLGVP RHTFSAVFGA IIARGLDYRE TFQVFRPGFD
LTEERERRTA AGQPESFTEE DLYPDARPCL AALRESGLQV GLAGNQTARA ETILRALDLP
VDVIGTSDGW GVEKPSTAFF DRVITEAGCP ADQVLYVGDR LDNDIRPAQE AGIATALVRR
GPWGYILGDK TVSDRCMFQL DSLAELPDLV RKHNQSAR
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